KEGG   Neisseria cinerea: NCTC10294_01464
Entry
NCTC10294_01464   CDS       T06828                                 
Symbol
hrpA'
Name
(GenBank) ATP-dependent DNA helicase
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
ncz  Neisseria cinerea
Pathway
ncz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCTC10294_01464 (hrpA')
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncz03041]
    NCTC10294_01464 (hrpA')
   03009 Ribosome biogenesis [BR:ncz03009]
    NCTC10294_01464 (hrpA')
Enzymes [BR:ncz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     NCTC10294_01464 (hrpA')
Spliceosome [BR:ncz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    NCTC10294_01464 (hrpA')
 Complex B
    NCTC10294_01464 (hrpA')
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    NCTC10294_01464 (hrpA')
Ribosome biogenesis [BR:ncz03009]
 Eukaryotic type
  90S particles
   Helicases
    NCTC10294_01464 (hrpA')
SSDB
Motif
Pfam: Helicase_C DEAD AAA_22 AAA_19 AAA_23 nSTAND3 ABC_tran NACHT AAA_30 ResIII T2SSE AAA_11 RsgA_GTPase ATPase SRP54 PhoH SLFN-g3_helicase AAA_25 AAA_29 cobW
Other DBs
NCBI-ProteinID: SQF83982
Position
1:1487441..1488832
AA seq 463 aa
MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAALPKPEFDNTLP
VHEKLDEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARSV
AERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIIDE
AHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVEI
LYRPLTSKDEDDAEVELTDAIVDAADELARHGEGDILVFLPGEREIREATEALRKSPLRR
NDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRYS
ARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRTEFTDPEIVRSNLAA
VILRMAALKLGDVAAFPFLEAPDQRYINDGFQVLLELGAVEAV
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtttcccgatttctcccaaaccctctccaaagaccgccacttcctgcaatccgccttc
aaaaatcccaacaaatacggcggcttgtccaaagtcgaagaaaaataccgaaaatcgcac
gaaatctttttgaagcgtttggccgcattgcccaagcccgaattcgacaacacgctgcct
gttcacgaaaaactcgacgaaatcaaaaaagccattgccgagaatcaggtaacgattatc
tgcggcgaaaccggttcgggcaaaaccacgcagttacccaagatttgtttggaactcgga
cgcggggcggcagggctgatcgggcatacccagccgcgccgtttggccgcgcgttcggtg
gcagagcggattgccgaagagctgaaatccgaaatcggcagcgcggtcggctataaagtg
cgctttaccgaccacacctcgcgcgatgcctgcgtcaagctgatgaccgacggcatcctg
ttggcagaaacccagaccgaccgttatctcgccgcctacgacacgattatcatcgacgaa
gcgcacgaacgcagcctgaacatcgacttcctcttgggctatttgaaacagctcctgccg
cgccgccccgatttaaaagtcatcatcacctcggcaaccatagacgcagaacgcttctcc
caacacttcaacggcgcgcccgtactggaagtgagcgggcgcacttatcccgtcgaaatc
ctctaccgcccgctgaccagcaaagacgaagacgatgcagaagtcgagctgaccgacgcg
attgtcgatgcggcggacgaattggcgcgacacggcgaaggcgatattttggtgtttctg
ccaggcgaacgcgaaatccgcgaagccaccgaagctctgcgcaaatccccgctgcgccgc
aacgacgaaatcctgcccctgttcgcacgcctgtcgcacgccgaacagcacaaaatcttc
catccttcgggcgcgaaacgccgcatcgtgttagcaaccaacgtcgccgaaacctcgctc
accgtgccgggcatcaaatacgtcatcgacaccggcctcgcgcgcgtcaaacgctattcc
gcacgggcgaaggtggaacagctccatgtagagaaaatctcccaagccgccgcccgccaa
cgttccggccgctgcggccgcgtctccgcaggcgtgtgtatccgactgttttcagaagaa
gatttcaacagccgcaccgaattcaccgaccccgaaatcgtccgcagcaacctcgccgcc
gtcatcctacgcatggcagcgttgaaactgggcgacgtggcggcattcccattcctcgaa
gcaccagaccagcggtatatcaatgacggttttcaggtgttgttggagttgggtgcggtg
gaggccgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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