KEGG T01248: Ndas

Nocardiopsis dassonvillei: Ndas_1991

Entry

Ndas_1991         CDS       T01248

Name

(GenBank) ribonuclease Z

K00784

ribonuclease Z [EC:3.1.26.11]

Organism

nda Nocardiopsis dassonvillei

Brite

KEGG Orthology (KO) [BR:nda00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nda03016]
    Ndas_1991
Enzymes [BR:nda01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     Ndas_1991
Transfer RNA biogenesis [BR:nda03016]
Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Ndas_1991
Prokaryotic type
    Ndas_1991

SSDB

Motif

Pfam:

Lactamase_B_2 Lactamase_B Lactamase_B_4

Other DBs

NCBI-ProteinID:

ADH67417

UniProt:

D7B6F2

Position

1:complement(2411964..2412893)

AA seq 309 aa
MSVRELVVLGTSSAVPTRRRNHNGYFLRWDTHGVLFDPGEGTQRQMRLAGLAATDITRIC
VTHFHGDHCLGLPGTIQRIARDRVPHTVRVAYPADGQSYWRRLRHATAFHDTDVVLPQPV
GGTGSCLLGESDLRVTALPLRHSTTAYGYRLAEPDGWRMLPERLAAHGVRGPMVGELQRR
GSVTTAQGRRVELADCARPRRGQVMAFVMDTAECEEAVELARGADMLVIESTYLDTEEHL
ARAYGHLTARQAGRVAARAGARTLVLTHISERYEDRDDARFLAEAAAEFDGPLTLAQDLQ
RLPVPPRDS

NT seq 930 nt +upstreamnt +downstreamnt
atgtccgtacgcgaactcgtggtcctgggcacctccagcgcggtgcccacccgccgccgc
aaccacaacggctacttcctgcgctgggacacccacggcgtcctgttcgaccccggcgag
gggacccagcgccagatgcgcctggcgggcctggccgccaccgacatcacccgcatctgc
gtcacccacttccacggcgaccactgcctgggcctgcccggcaccatccagcgcatcgcc
cgcgaccgggtgccccacaccgtgcgcgtggcctaccccgccgacggccagagctactgg
cggcggctgcgccacgccaccgccttccacgacaccgacgtcgtactcccccagccggtc
ggcggcaccggttcctgtctgctgggcgagtcggacctgcgcgtcaccgcgctgccgctg
cgccactcgaccaccgcctacggctaccggctggccgaaccggacggctggcggatgctg
cccgaacggctggccgcccacggcgtgcgcggccccatggtcggcgaactccagcggcgg
gggtcggtcaccaccgcccaggggcgccgcgtggagctggccgactgcgcgcggccgcgc
cggggccaggtcatggcgttcgtgatggacaccgccgagtgcgaggaggcggtcgaactc
gcgcgcggagccgacatgctggtgatcgagtcgacctacctggacaccgaggagcacctg
gcccgcgcctacggccacctgaccgcccgccaggccgggcgcgtggccgcgcgcgccggg
gcgcgcaccctggtgctcacccacatctccgaacgctacgaggaccgcgacgacgcccgc
ttcctcgccgaggccgccgccgagttcgacgggcccctcacactggcccaggacctgcaa
cgcctgccggtgccgccccgcgactcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system