KEGG   Nocardiopsis dassonvillei: Ndas_4311
Entry
Ndas_4311         CDS       T01248                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
nda  Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:nda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nda03032]
    Ndas_4311
   03400 DNA repair and recombination proteins [BR:nda03400]
    Ndas_4311
Enzymes [BR:nda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Ndas_4311
DNA replication proteins [BR:nda03032]
 Prokaryotic type
  DNA Topoisomerases
   Ndas_4311
DNA repair and recombination proteins [BR:nda03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Ndas_4311
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: ADH69700
UniProt: D7AW40
Position
1:complement(5143959..5144981)
AA seq 340 aa
MSLRRSDPAEPGITRRRRGRGHSYHGPDGKPVTDPDQIRRIKELVVPPGWHDVWICPSPE
GHIQACGTDDAGRRQYLYHAEWRRRSEEAKYDRMLDFAELLPRIRGTLAEHLGRRGLRRE
RVLAAAVRLIDLGFLRAGGDAYAARNDSYGVASLLREHVHRRRGTVVFEFPGKSGQDQRV
ECAEPEICRVVSGLQRVRSPGQDLFAYRVGDDWHDVNTDDLNSYLREVAGEEHTVKEFRT
WHATVLAAVGVAVAVPPEDDRALARLRTHVVREVADYLGNTEAVARDSYIDPRVFRLHER
GVTIAGALPELGGEASAGELATQGGVEEAVLRMLRDNGDA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgagcctgcggcgcagcgacccggccgagccggggatcaccaggcgtcgtcgcggtcgc
ggacacagctaccacggcccggacggcaagccggtcaccgaccccgaccagatccggcgc
atcaaggaactcgtcgtgcccccgggctggcacgacgtgtggatctgcccctcgcccgag
gggcacatccaggcgtgcggcaccgacgacgcgggccgccgccagtacctctaccacgcc
gagtggcggcgccggagcgaggaggccaagtacgaccggatgctcgacttcgccgaactg
ctccccaggatccgcggcacgctggccgagcacctgggccgccgcggactgcggcgcgag
cgcgtcctggccgcggccgtccgcctgatcgacctcggcttcctgcgggcggggggcgac
gcctacgccgcccgcaacgactcctacggggtggcgagcctgctgcgcgagcacgtccac
cgcagacgcggcacggtggtgttcgagttccccggaaagtccggccaggaccagcgcgtc
gagtgcgccgaacccgagatctgccgggtggtctccggcctccagcgcgtccgctcaccg
gggcaggacctgttcgcctaccgcgtcggcgacgactggcacgacgtgaacaccgacgac
ctcaactcctacctgcgcgaggtcgccggggaggagcacacggtcaaggagttccgcacc
tggcacgcgacggtcctggccgcggtcggggtggcggtggccgtgccgcccgaggacgac
agggccctggcccggctgaggacccacgtggtccgcgaggtggccgactacctgggcaac
accgaggcggtggcccgggactcctacatcgacccccgcgtcttccggctgcacgagcgg
ggtgtgacgatcgccggggcgctgcccgaactgggcggtgaggcgtccgcgggcgaactc
gccacccagggcggggtggaggaggcggtgctgcgcatgctgcgcgacaacggcgacgcc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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