KEGG   Nitrospira defluvii: NIDE0596
Entry
NIDE0596          CDS       T01281                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nde  Nitrospira defluvii
Pathway
nde00300  Lysine biosynthesis
nde00470  D-Amino acid metabolism
nde01100  Metabolic pathways
nde01110  Biosynthesis of secondary metabolites
nde01120  Microbial metabolism in diverse environments
nde01230  Biosynthesis of amino acids
Module
nde_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NIDE0596 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NIDE0596 (dapF)
Enzymes [BR:nde01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NIDE0596 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: CBK40369
UniProt: D8PAW0
Position
complement(562792..563661)
AA seq 289 aa
MKNGFFRGHGLGNDYVVMDPTELTFTLTPGKIRGICDRHWGLGSDGILALVPSKKADFGL
RIYNPDGSEAEKSGNGLRIFARYLHATGKTKKRAFTVETKGGLVSIALHIDRHGDAAAAT
VEMGRATFQPSALPCTLSVDELIQQPIEAAGRALQFTGVSVGNPHCVIFKQAGETWTREE
LLALGPVLENHPLFPKRTNVQLAVPTGPKEIFILIWERGAGETQASGSSSCAAASAAVRL
GLVKGPVTVKMPGGTLNIEVARDFSLTMKGPVAEVARGALSPSFVRTLR
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaagaacgggtttttccgcggacacggactcggcaacgactatgtggtgatggatccc
acggaactgacgtttacactcacccccggcaaaatccgcggcatctgcgatcgccactgg
ggactgggaagcgacgggatcctggcgctggtcccgtcgaaaaaagccgacttcggcctg
cgcatctacaatcctgacggcagcgaggcggaaaaatccggcaatggcctgcgcatcttc
gcccgctacctgcatgccaccggcaaaaccaaaaaacgagccttcaccgtcgaaaccaaa
gggggcttggtctccattgccctccatatcgaccgccacggcgatgccgctgccgccacg
gtcgagatgggccgggcgacgtttcaaccgagtgcccttccctgcacgctctccgtcgat
gaactgatccagcagcctatcgaagccgccggacgtgcgctgcaattcaccggcgtcagc
gtcggcaatcctcactgcgtgattttcaaacaagccggcgaaacctggacgagggaagag
ctcctcgcactggggcctgtgctcgaaaaccatcctctcttcccgaaacggaccaacgtc
caacttgcggtgcccaccggccccaaagaaatctttattctgatctgggaacgcggtgcc
ggagaaacgcaggcctccggatcgtcttcctgcgcggctgccagcgccgccgtccgtctc
gggctggtgaagggaccggtcacggtcaagatgcccggcggcacgctcaacatcgaagtc
gcccgggacttcagcctaacgatgaaaggcccggtggcagaggtcgcccgaggcgctctg
agtccatcgtttgtgcgaacgctgcgctga

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