KEGG   Nitrospira defluvii: NIDE1336
Entry
NIDE1336          CDS       T01281                                 
Symbol
rpsM
Name
(GenBank) 30S ribosomal protein S13
  KO
K02952  small subunit ribosomal protein S13
Organism
nde  Nitrospira defluvii
Pathway
nde03010  Ribosome
Brite
KEGG Orthology (KO) [BR:nde00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    NIDE1336 (rpsM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nde03011]
    NIDE1336 (rpsM)
Ribosome [BR:nde03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    NIDE1336 (rpsM)
  Bacteria
    NIDE1336 (rpsM)
  Archaea
    NIDE1336 (rpsM)
SSDB
Motif
Pfam: Ribosomal_S13 IMS_HHH
Other DBs
NCBI-ProteinID: CBK41086
UniProt: D8PCX7
Position
1282511..1282900
AA seq 129 aa
MARIAGVDLPKDKRIDIGLTYVYGIGRVAAQVILKKAGVDGSIRVKDVSEDKIVKIREVI
ERDYRVEGDLRKEVSMNIKRLVDTGTFRGLRHRKGLPVRGQRTKTNARTRKGRRSGVGSK
PQKPAGSRA
NT seq 390 nt   +upstreamnt  +downstreamnt
atggcgcgtattgcgggcgtggatttgccaaaagacaaaaggatcgatatcggtctgacc
tatgtgtacgggattggtcgggttgccgctcaggtgattctgaagaaggccggagtcgat
ggatccattcgcgtgaaagatgtcagtgaggacaagatcgtcaagattcgagaagtcatc
gaacgtgactatcgcgtggaaggcgatttgcgtaaagaagtgtcgatgaacatcaagcga
ctggtggataccggaacatttcgtgggctccggcatcgcaaggggttgcctgttcgtgga
cagcggaccaagaccaatgcgcgtacccgcaaggggcgccgctccggtgttggaagcaaa
ccgcagaagcccgctggttcaagagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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