KEGG   Naumovozyma dairenensis: NDAI_0A05860
Entry
NDAI_0A05860      CDS       T02234                                 
Symbol
NDAI0A05860
Name
(RefSeq) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
ndi  Naumovozyma dairenensis
Pathway
ndi03013  Nucleocytoplasmic transport
ndi03015  mRNA surveillance pathway
ndi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ndi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NDAI_0A05860 (NDAI0A05860)
  09122 Translation
   03013 Nucleocytoplasmic transport
    NDAI_0A05860 (NDAI0A05860)
   03015 mRNA surveillance pathway
    NDAI_0A05860 (NDAI0A05860)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ndi03019]
    NDAI_0A05860 (NDAI0A05860)
   03041 Spliceosome [BR:ndi03041]
    NDAI_0A05860 (NDAI0A05860)
   03009 Ribosome biogenesis [BR:ndi03009]
    NDAI_0A05860 (NDAI0A05860)
   03012 Translation factors [BR:ndi03012]
    NDAI_0A05860 (NDAI0A05860)
Messenger RNA biogenesis [BR:ndi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NDAI_0A05860 (NDAI0A05860)
   mRNA cycle factors
    Stress granule specific factors
     NDAI_0A05860 (NDAI0A05860)
Spliceosome [BR:ndi03041]
 Complex C
  Other components
   EJC/TREX
    NDAI_0A05860 (NDAI0A05860)
Ribosome biogenesis [BR:ndi03009]
 Eukaryotic type
  90S particles
   Helicases
    NDAI_0A05860 (NDAI0A05860)
Translation factors [BR:ndi03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    NDAI_0A05860 (NDAI0A05860)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_19 AAA_22 UvrD-helicase AAA_30 Helicase_RecD tRNA-synt_1b
Other DBs
NCBI-GeneID: 11495426
NCBI-ProteinID: XP_003667984
UniProt: G0W4K3
Position
1:complement(1331381..1332580)
AA seq 399 aa
MSLNRDLDTKLKFKTSKKLKVSSTFESMSLKPNLLKGIYSYGFESPSSIQSRAITRIIAG
NDVIAQAQSGTGKTATFTIGMLQIIDSDKKQLQGLILSPTRELAVQINQVVGNLGDYMNV
KSMAMIGGKMMKEDLKKINKNSCHVISGTPGRILDMIKRQLLNVRNIQILVLDEADELLS
EILGFKQQIYDIFAKLPKSCQVVVVSATMDKNILEITKKFMNDPVKILVKQDEISLEGIK
QYIVNVDKEDWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSAKLAQANFAVVSMHGDMK
QEDRDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFG
RKGVAINFITKSDGSTLKEIERFYHIKINPMPANLADLS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtcgttaaacagagacctagatacaaaattaaaattcaaaacatcgaaaaaattgaaa
gtatcatccacattcgaatccatgtcattaaaaccaaacctactgaaaggtatctactct
tatggtttcgaatcaccttcctcaattcaatcaagagctatcactagaatcatcgcaggt
aatgatgtcattgcacaagctcaatctggtaccggtaagacggccacttttaccattgga
atgttacaaattattgattctgataagaaacaattacaaggtttgatattatcccccaca
agagaattggctgttcaaattaatcaagtagtggggaatttaggtgattatatgaatgtt
aagtcaatggctatgattggtgggaagatgatgaaagaggatcttaagaagattaataaa
aattcatgtcatgtgattagtgggactccaggtagaattttagatatgattaaaaggcaa
ttattaaacgttagaaatattcaaattttagtgttagatgaagctgatgaactgttaagt
gaaatattaggttttaaacaacaaatttatgatatctttgctaaattaccgaaaagttgc
caagtggtagttgtgagtgcaacaatggataaaaacattttagaaataaccaaaaaattt
atgaatgatcccgtaaagattttagtgaaacaagatgaaatttctcttgaggggattaaa
cagtatatagtcaatgttgataaagaagattggaaattcgatactttatgtgatatttat
gattccttgactataacacaatgtgttattttttgtaatacaaagaaaaaggtagattgg
ttatcagcaaaattggctcaagcaaactttgcagtcgtttccatgcatggtgatatgaaa
caggaagatagagataaagttatgaatgattttaggacaggccattcccgtgttttaata
tcaacagatgtctgggctcgtggtatagatgtgcaacaagtttcattggtgataaattat
gatttacctgaaaatatggaaaattatattcatagaataggtagaagtggaagattcgga
agaaaaggtgttgcaattaacttcatcacgaagagtgacggatcaaccttgaaagagata
gagaggttttatcatataaagataaatcctatgccagccaacctggcagacttgtcataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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