KEGG T05939: E2C04

Nocardioides daphniae: E2C04_07765

Entry

E2C04_07765       CDS       T05939

Name

(GenBank) rRNA cytosine-C5-methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

ndp Nocardioides daphniae

Brite

KEGG Orthology (KO) [BR:ndp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ndp03009]
    E2C04_07765
Enzymes [BR:ndp01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     E2C04_07765
Ribosome biogenesis [BR:ndp03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    E2C04_07765

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB FtsJ

Other DBs

NCBI-ProteinID:

QCC77136

UniProt:

A0A4P7UB11

Position

1583611..1584993

AA seq 460 aa
MGEPTRRRHGARRQSRPGPGTAPPSRPRVDPSRRAAWEVLKAVRVDDAYANLVLPQVLEK
YRLTGRDAAFTTELAAGAIRGQGTYDAIIDVCLTKPKLEGKVRDVLRLGAHQLLAMRVPD
HAAIATSVELTRDRVGQGPTGLVNAVLRKVAAQDLAAWVDQVAPGAPGSTARLAVATSHP
AWVVDALAEALDGHGRDVSELPALLEADNAAPQVTLVARPGLVDDDEMRAAGAEPTGRSP
YAWTWGGGDLTAVPAIVQGRAGVQDEGSQRVALALADATVEGRDERWLDLCAGPGGKSAL
LAALAAQRGGKVLANEAQHHRAQLVSRGVRSVQDGMLGVVTGDGTRPAWRPDTFDRALVD
APCSGLGALRRRPESRWRRRPSDVDTLVRLQRALLVTALDAVRPGGVVVYATCSPVVAET
VGVVSAVLRARDDAHLETSWQLWPHLDGCDAMYAATLRRT

NT seq 1383 nt +upstreamnt +downstreamnt
atgggtgagcccacgcgacgccgccacggcgcccgccgccagagtcgtcccggccccggc
accgccccgccgtcgcgcccccgtgtggacccgtcccgccgggccgcgtgggaggtgctg
aaggcggtccgcgtcgacgacgcctacgccaacctggtgctgccccaggtcctggagaag
taccggctgaccggtcgcgacgccgccttcacgaccgagctcgccgcgggcgcgatccgc
ggccagggcacgtacgacgcgatcatcgacgtctgcctcaccaagccgaagctggagggc
aaggtccgcgacgtgctgcgcctcggcgcccaccagctgctggcgatgcgggtgcccgac
cacgccgcgatcgcgaccagcgtcgagctgacccgcgaccgcgtcggccaggggcccacc
ggactcgtcaacgcggtgctccgcaaggtggccgcccaggacctggctgcgtgggtcgac
caggtggcgcccggcgcgcccggctccaccgcgcgcctggccgtcgccacctcccacccg
gcctgggtggtcgacgcgctcgccgaggcactcgacggccacggccgtgacgtctccgag
cttccggcgctcctcgaggccgacaacgctgccccgcaggtcaccctcgtcgcccgcccc
gggctggtggacgacgacgagatgcgggccgccggcgccgagcccaccggccggtcgccg
tacgcctggacctggggtggcggcgacctgaccgccgtccctgcgatcgtgcaggggcgc
gccggcgtccaggacgagggctcccagcgggtggccctggcgctggccgacgcgacggtc
gagggccgtgacgagcgctggctcgacctgtgcgcgggcccgggtggcaagagcgccctg
ctcgccgccctggccgcgcagcgggggggcaaggtgctggccaacgaggcgcagcaccac
cgtgcccagctcgtgtcgcgcggcgtgcgctcggtgcaggacgggatgctcggggtggtc
accggcgacggcacccgtcccgcctggcgccccgacaccttcgaccgggcgctcgtcgac
gccccgtgctcgggcctcggcgcgctgcgccgacgccctgagtcgcgctggcgacgcagg
cccagcgacgtcgacaccctggtgcggctgcagcgagccctcctggtcaccgccctggac
gccgtacgtcccggcggcgtcgtcgtctacgcgacctgctcaccggtggtcgcggagacc
gtcggtgtggtgtcggcggtgctccgggcccgcgacgacgcccacctggagacgtcgtgg
cagctgtggccgcacctggacggctgcgacgcgatgtacgccgccaccctgcgccgcacc
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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