KEGG T05650: NCHU2750

Neorhizobium sp. NCHU2750: NCHU2750_04720

Entry

NCHU2750_04720    CDS       T05650

Symbol

rumA

Name

(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

nen Neorhizobium sp. NCHU2750

Brite

KEGG Orthology (KO) [BR:nen00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nen03009]
    NCHU2750_04720 (rumA)
Enzymes [BR:nen01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     NCHU2750_04720 (rumA)
Ribosome biogenesis [BR:nen03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    NCHU2750_04720 (rumA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Cons_hypoth95 MTS TRAM Methyltransf_31 Met_10 Methyltransf_25 Hydrolase

Other DBs

NCBI-ProteinID:

AYC99869

Position

complement(508573..509817)

AA seq 414 aa
MSTVTITIERLGAQGHGIAEGEDGPVYVPYALPGETLAIARNGDHGTVMSTSNPSPDRIE
PICRHFNPDRDNCGGCSLQHLAAPAYLAFKRGLVVDALKSRGLTPEVGETIACHPGERRR
TVFSVRKTEKELLLGFNRAETNHIVSIEECPIASPGIMARLAAIRAVAAALAQGSETFRL
TVLETLSGLDLAAEGLKKLDDRQRRSVTEAVLSLKGIARVSVNGEIVLEPVKPVIDFGGV
SVSPPPGAFTQATKPAEDAMAELVIGHIGKSKRVVDLFAGSGTFSLRIARKAKVHAVEGE
DKPIKALDLAARNTQGLKPVTVEKRDLFRRPVTAQELKVFDAAVFDPPRAGAEVQVKELA
RSGIKTIVAVSCNPATLARDLKILVDAGYRITSVTPIDQFLWSPHVEAVALLSR

NT seq 1245 nt +upstreamnt +downstreamnt
atgagcacggtcaccatcacgatcgagcggctgggcgcccagggccatggcattgccgag
ggcgaggacgggccggtctatgtgccctatgcgctgcccggcgaaacgctggcgatcgcc
cgcaacggcgaccatggcacggtcatgtcgacctccaatccctcgccggaccggatcgag
ccgatctgtcggcatttcaatcccgaccgggacaattgtggcggctgttcgctgcagcat
ctggcggcaccggcctatctcgccttcaagcgtgggctcgtcgtcgacgcgctgaaatcg
cgcgggctgacgcccgaggtgggcgagacgatcgcctgccatcccggtgaacggcggcgt
acggtattttcggtgcgcaagaccgagaaggaactgctgctcggcttcaatcgcgccgag
accaatcacatcgtgtctatcgaggaatgtcccatcgcctcgccgggcatcatggcgagg
cttgccgcgatccgcgccgtggccgcagcgcttgcgcaaggatcggagacattccgcctg
accgtgcttgagacgctttcggggcttgatctggccgccgaggggttgaagaagctcgac
gacaggcagcgccgctcggtcaccgaggcggtgttgtccctgaagggcattgcccgcgtt
tccgtcaatggcgagatcgtgctggagccggtcaagccggtgatcgatttcggcggcgtt
tccgtttcaccgccgcccggcgcctttacccaggcgaccaagccggcggaagatgcgatg
gcagaactggtcatcggccatatcggcaagtcgaagcgggtggtcgacctgtttgccggc
tcgggtacgttttcgctcaggatcgcccgcaaggccaaggtgcatgcggtggaaggcgag
gacaagccgatcaaggcgctcgatcttgccgcccgcaatacacagggcctcaaacccgtg
acggtggagaagcgcgacctgttccgccggccggtgacggcacaggagctgaaggtcttt
gacgctgccgtgttcgacccgccgcgggccggcgccgaagtgcaggtgaaggagcttgcc
cgctccggcatcaagacgatcgttgccgtcagctgcaaccccgcgacactggcgcgggat
ctcaaaatcctcgtcgatgccggttaccgcatcacgtcggtgacgccgatcgaccagttt
ttgtggtcgccgcatgtggaggcggtggcgctgctttcgcgctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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