KEGG   Neorhizobium sp. NCHU2750: NCHU2750_19920
Entry
NCHU2750_19920    CDS       T05650                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nen  Neorhizobium sp. NCHU2750
Pathway
nen00010  Glycolysis / Gluconeogenesis
nen00020  Citrate cycle (TCA cycle)
nen00260  Glycine, serine and threonine metabolism
nen00280  Valine, leucine and isoleucine degradation
nen00310  Lysine degradation
nen00380  Tryptophan metabolism
nen00620  Pyruvate metabolism
nen00630  Glyoxylate and dicarboxylate metabolism
nen00640  Propanoate metabolism
nen00785  Lipoic acid metabolism
nen01100  Metabolic pathways
nen01110  Biosynthesis of secondary metabolites
nen01120  Microbial metabolism in diverse environments
nen01200  Carbon metabolism
nen01210  2-Oxocarboxylic acid metabolism
nen01240  Biosynthesis of cofactors
Module
nen_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nen_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nen_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nen_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nen00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NCHU2750_19920 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NCHU2750_19920 (lpdA)
   00620 Pyruvate metabolism
    NCHU2750_19920 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NCHU2750_19920 (lpdA)
   00640 Propanoate metabolism
    NCHU2750_19920 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NCHU2750_19920 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NCHU2750_19920 (lpdA)
   00310 Lysine degradation
    NCHU2750_19920 (lpdA)
   00380 Tryptophan metabolism
    NCHU2750_19920 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NCHU2750_19920 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nen04147]
    NCHU2750_19920 (lpdA)
Enzymes [BR:nen01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NCHU2750_19920 (lpdA)
Exosome [BR:nen04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NCHU2750_19920 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like NAD_binding_8 2-Hacid_dh_C GIDA FAD_binding_3 DAO Lys_Orn_oxgnase Thi4 AlaDh_PNT_C Amino_oxidase 3HCDH_N CDCA OTCace Lycopene_cycl
Other DBs
NCBI-ProteinID: AYD01379
Position
complement(2043105..2044550)
AA seq 481 aa
MSNAYDLIVIGAGPGGYIAAIRAAQLGMKVAVVEREHLAGICSNWGCIPTKALLRTADVM
HTATHAKDYGLTLEGSIKPDVKAIVARSRGIAARMNNGVGFLFKKNKVDIIWGEAKLTKP
GEIVVGKSTKPVVQPQGPVPKNTLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEELPKSLLVMGSGAIGIEFASFYNAMGVDVTVVEIMTQVMPVEDAEISAFAKKQFE
KQGIKIHLEAKVAKVEKGANSITATVEKKDGTSEKITADRMISAVGVQANIENIGLEAVG
VKTERGFIVIDGYGKTNVPGIYAIGDVAGGPLLAHKAEHEAVVCVEKIAGLPNVHATDKG
KIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFAANGKAVALGEDQGMVKTIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTISETMKESVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtccaacgcttatgaccttatcgtaatcggcgccggccccggcggttatatcgccgcc
attcgtgccgcacagctcggcatgaaggttgccgtcgtcgaacgcgagcatctcgccggt
atttgctccaactggggctgcatcccgaccaaggctctgctgcgcacggccgacgtcatg
catactgcaacccatgccaaggattacggtctgacgctcgaaggctcgatcaagccggac
gtcaaggcgatcgtcgcgcgttcgcgcggcattgccgcccgcatgaacaacggcgtcggc
ttcctgttcaagaaaaacaaggtcgatatcatctggggtgaagccaagctcaccaagccg
ggcgaaatcgtcgtcggcaagtcgaccaagccggttgtccagccgcagggtccggtgccg
aagaacacgctgggcgagggcacctataccgccaagcacatcatcgtcgccaccggcgcc
cgtccgcgcgcgctgcccggcatcgagccggacggcaagctgatctggacctatttcgaa
gcgatgaagccggaagagctgccgaagtcgctgctcgtcatgggttcgggcgcgatcggc
atcgagttcgcctccttctacaatgccatgggcgtcgacgtcaccgtggtcgagatcatg
acccaggtcatgccggtcgaggatgccgaaatttccgccttcgccaagaagcagttcgaa
aagcagggcatcaagatccatctggaagccaaggtcgccaaggtggagaagggtgcaaac
tcgatcaccgcgacggtcgagaagaaggacggcacgtcggagaagatcactgccgaccgg
atgatctcggccgtcggcgttcaggccaatatcgagaacatcggccttgaggctgtaggc
gtaaagactgagcgcggcttcatcgtcatcgacggttacggcaagaccaacgttcccggc
atctatgcaatcggtgacgtcgccggtggcccgctgctcgcccacaaggccgagcatgag
gccgtcgtctgcgtcgagaagatcgccggcctgccgaatgttcacgccaccgacaagggc
aagatcccgggctgcacctactgcaacccgcaggtcgcctcggtcggtcttaccgaagcg
aaggctaaggaacagggtcgcgacatccgcgtcggtcgcttctcctttgccgccaacggc
aaggccgtggcactcggcgaggaccagggcatggtcaagacgatcttcgacaagaagacc
ggcgagctgctcggcgctcacatggtcggcgcggaagtcaccgaactgatccagggcttt
gtcgtggcgatgaacctcgagacgactgaagaagacctgatgcacacgatcttcccgcat
ccgaccatttcggaaacgatgaaggaaagcgtgctggacgcctatggccgcgtactgaac
gcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (20)   
   Pfam (20)   
All databases (87)   

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