KEGG   Neorhizobium sp. SOG26: CYG48_04560
Entry
CYG48_04560       CDS       T05626                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
neo  Neorhizobium sp. SOG26
Pathway
neo03030  DNA replication
neo03430  Mismatch repair
neo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:neo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYG48_04560
   03430 Mismatch repair
    CYG48_04560
   03440 Homologous recombination
    CYG48_04560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:neo03032]
    CYG48_04560
   03400 DNA repair and recombination proteins [BR:neo03400]
    CYG48_04560
Enzymes [BR:neo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CYG48_04560
DNA replication proteins [BR:neo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CYG48_04560
DNA repair and recombination proteins [BR:neo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CYG48_04560
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655
Other DBs
NCBI-ProteinID: AXV15032
UniProt: A0A346YKN5
Position
928897..932397
AA seq 1166 aa
MAETAATISEPAGLGASPHFVHLRVHSAYSLLEGALPLKKILSKAVADNQPAIAVTDTNN
LFVALEFAQKAIGEGLQPIIGCQMSIDMQDQTDERRSSHQQLAKLPAIVLLAATAAGYER
LVDLVSRAYLGGEGSHQSVHICHSWLEEGGAEGLIALTGAASGPVDMAMKEGDATLATAR
LLKLRQIFGDRLYVELQRHGSYDRRHEHKMVTLAYDHDLPLVATNEAFFPSKADYEAHDA
LMAVAHNAIVSDDSRFRLTPDHYLKSREEMAKLFADLPEALDNTVEIARRCSFVLKTRSP
ILPRFTGATDDAAEAERAEAQELHRQAVEGLEKRIAELGISPGFTHQDYRERLDFELSII
ERMKFPGYFLIVSDFIKWAKSQNIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFL
NPERVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDIGRVLEMP
YGQVDRICKLVPNNPANPTPLSKAIEDEPKFQEEIEKEPVVGRLLDIAQKIEGLYRHAST
HAAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVD
FCRKRGIEVDLAKIPLDDKKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALV
ALYRPGPMENIPVYNARKHGEEEIESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSL
GEADLLRRAMGKKIKEEMDKQRARFVEGAVKNGVSKPQSDLIFDLLAKFANYGFNKSHAA
AYAIVSYQTAYMKAHYPVEFLAASMTYDMANSEKLNDFRQDAGRLGIAVIPPSVQTSYRH
FETGENKIYYALAALKGVGDSAVEHITEVRGDHPFESLEDFCLRVDPKQVNRRVLESLIS
AGAFDCFGIDRAELIGGLDRIIGYALSAHQEKASGQMGFFGASSSTGPEKLILPPFNPWT
PSEKLMREYQVLGFYLSAHPLDSYANILAKMRVQTFAEFSVSVKAGATVGKLAGTVTSRQ
ERKTRTGNKMGIVAFSDSSGQYEAVLFSEALAQYRDLLEPGKSLLITVQAEERPEGIGLR
IQTAQSLEEKSVQMQKALRVYLRDSSPLRAVARHLNARGDGLVSFVVIKDDGQREIEVEL
TEKYRISPEIAAALKAAPGVLDVELL
NT seq 3501 nt   +upstreamnt  +downstreamnt
atggcagagacggcggcaaccatatcggaaccggcaggattgggcgcttccccgcacttc
gttcacctgcgtgttcattccgcctattcgcttcttgaaggcgcgctgccgctcaagaag
atcctgtcaaaggccgtcgcggacaatcagcccgcgatcgccgttaccgacacaaacaat
ctctttgtcgcgctggaatttgcccagaaggcgatcggcgaggggctgcagccgatcatc
ggctgccagatgtcgatcgacatgcaggaccagaccgacgagcgccggtcgagccaccag
caactcgccaagcttccggcgatcgtcctgttggccgcaacagcggccggttacgagcgt
ctggtcgacctggtgagccgcgcttatcttggcggcgagggaagccatcagtcggtgcat
atctgccactcctggctggaagagggtggcgctgaaggcttgatcgcgctgacgggtgct
gcgagcggcccggtcgacatggcgatgaaggaaggcgatgccacgcttgccaccgcgcgg
ctcctcaagctgaggcagatctttggtgaccggctttatgtcgagctgcagcgtcacggg
tcctatgaccgtcgccacgagcacaagatggtgacgcttgcctatgaccacgacctgccg
ctggtcgccaccaacgaagccttcttcccgtccaaggccgattacgaggcccatgacgcg
ctgatggcggtcgcccataacgcgatcgtctccgatgacagccgtttccgcctgacgccg
gaccactacctgaagagccgcgaggaaatggcaaagctgtttgccgatcttcccgaggcg
ctcgacaacacggtggagattgcccgccgctgctccttcgtgctgaagacgcgcagcccc
atcctgccgcgctttaccggcgccactgatgatgcggcggaggccgagcgcgccgaggcg
caagagcttcaccgccaggcagtcgagggcctcgagaagcggatcgccgaacttggcatc
agccccggcttcacgcatcaggactaccgcgagcggctcgacttcgaactgtcgatcatc
gaacgcatgaagttcccgggctacttcctgatcgtttcggacttcatcaaatgggccaag
agccagaacattcctgtcggcccgggccgcggttcgggtgccggctcgctcgtcgcttat
gcgctgacgatcaccgacgttgatccgcttcgcttctcgctgctgtttgaacgcttcctc
aatccggaacgcgtttcgatgcccgacttcgatatcgacttctgccaggatcgccgcgaa
gaggtgatccgctacgtgcagcagaaatacggccgcgaacaggtggcgcagatcattaca
ttcggttcgctgcaggcgcgcgccgccctgcgtgacatcggtcgcgtgctcgaaatgccc
tatggccaggtcgaccggatctgcaagctcgtgccgaacaaccccgcgaacccgacgccg
ctgtcgaaggcgatcgaggacgagccgaagttccaggaggagatcgagaaggagcccgtc
gtcggccgcctgctcgacatcgcccagaagatcgaaggtctttaccgccacgcgtcgacc
cacgcggccggcatcgtcatcggtgaccgtccgttgtcgaagctcgtgccgatgtaccgc
gatccgcgttcggacatgccggtcacccagttcaacatgaagtgggtcgagcaggccggc
ctggtgaagttcgacttcctcggcctgaagacgctcacggtattgaagacggcagtcgat
ttctgccgcaagcgcggcatcgaggtggatctcgccaagatcccgctcgacgacaagaag
acctacgagatgttgtcgcgcggcgaaaccgtcggcgtgttccaggtggaaagtgccggc
atgcgcaaggcgctcatcggcatgcgcccggactgcatcgaggacatcatcgcgctcgtg
gcgctctatcgtccgggcccgatggaaaacattccggtctacaacgcccgcaagcacggc
gaggaggagatcgagtcgatccatccgatgatcgaccacctgctcaaggaaacccagggc
gttatcgtctaccaggaacaggtcatgcagatcgcccaggtgctgtcgggctattcgctc
ggcgaagccgacctgctgcgccgcgccatgggtaagaagatcaaggaggaaatggacaag
cagcgtgcccgcttcgtggagggcgcggtgaagaacggcgtgtccaagccgcagtccgac
ctgatcttcgatctgctggcgaagttcgccaactacggcttcaacaaatcgcacgccgcg
gcctacgccatcgtctcctaccagacggcctacatgaaggcgcattacccggtcgagttc
ctggccgcgtcgatgacctacgatatggccaacagcgaaaagctgaacgactttcgccag
gacgccggccgcctcggcatcgccgtcattccgccgtcggtgcagacgtcgtaccggcat
ttcgagaccggcgaaaacaagatctattacgcgctcgccgccttgaagggcgtgggcgat
tctgcggtggaacacattaccgaggtccgcggcgaccatccgttcgaaagcctggaggat
ttctgcctgcgggtcgatccgaaacaggtgaaccggcgtgtgctggaaagcctgatttcg
gctggcgcctttgattgctttggcatcgaccgcgcggaactgatcgggggcctcgatcgc
atcattgggtatgcactgagcgcccatcaggagaaggcgagcggccagatgggcttcttc
ggcgcatcctccagtaccggcccggaaaagctcatcctgccgccgttcaacccctggacg
ccgtcggaaaagctgatgcgcgaataccaggtgctgggcttctacctctcagcccacccg
ctcgattcctacgccaacatccttgccaagatgcgggtgcaaaccttcgcggaattctcc
gtttcggtgaaggcgggtgcgacggtcggcaagcttgccggcaccgttaccagccggcag
gagcgcaagacgcgcaccggcaacaagatgggcatcgtcgccttttccgattcgtcgggc
caatacgaggcggttctgttctccgaggcgctggcgcaataccgtgaccttctggaaccg
ggcaagtcgctgctcatcaccgtgcaggcggaagagcgcccggaaggcatcggcctgcgc
atccagacggcgcagtcgctcgaagaaaagtcggtgcagatgcaaaaggcgctgcgggtt
tacctccgggattcgagcccgctgcgcgccgtcgcccgtcatctcaatgcaaggggcgat
gggctggtctctttcgttgtcatcaaggacgacggccagcgcgagatcgaggtcgagctg
accgagaaataccggatctcgccggaaatcgccgcggcgctcaaggcagcgccgggcgtg
ctcgatgtggaactgctctga

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