KEGG   Neorhizobium sp. SOG26: CYG48_06205
Entry
CYG48_06205       CDS       T05626                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
neo  Neorhizobium sp. SOG26
Pathway
neo03410  Base excision repair
neo03430  Mismatch repair
neo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:neo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CYG48_06205 (recJ)
   03430 Mismatch repair
    CYG48_06205 (recJ)
   03440 Homologous recombination
    CYG48_06205 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:neo03400]
    CYG48_06205 (recJ)
DNA repair and recombination proteins [BR:neo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CYG48_06205 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CYG48_06205 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CYG48_06205 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: AXV15329
UniProt: A0A346YLI2
Position
1225533..1227365
AA seq 610 aa
MNKFVSAISPAAETVDPVPRAFLNVERSVGDQRWISRLDQAAQNRALAISQVHGIPELVA
RVLAGRGVSLDDAPAFLNPTIRALMPDPYTLTDCEKAVYRLTRAIDRGEKVAIFGDYDVD
GASSSALLYRFLRHFDVEAEIYIPDRIFEGYGPNPSAIRQLIANGAGLIVTVDCGSTSHE
ALAAARDEGCDVVVIDHHQLSHELPPCHALVNPNREDDLSGQGHLCAAGVVFMVLVGAAR
LMRERGDSRAKSLDLLGWLDLVALATVCDVVPLKGLNRAYVVKGLLAARHMGNQGLAALF
RKAGLGRPVTPYHFGFLVGPRINAGGRIGDAALGSRLLTLDDAVEAEEIAGRLDDLNRER
QAMEAAMLAEAESEVLAEYGTGENACVIVAARDSWHPGIVGLIAARLKEKFKRPAFAISF
DPSGKGTGSGRSINGFDMGRMVRAAVEEGLLVKGGGHAMAAGLTVERANLGRLRAFFEEK
SGESVPALVANHVLKIDGALSASGVTLDLFDVLEQAGPYGSGHSQPIFAIPAHRLKDARL
VGTAHVKITLEAADGARLEGIAFRAAETPLGNMLLNSRGSQIHVAGCLSADQWQGNRRIQ
LRVLDAARAG
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgaacaagtttgtgtctgcgatctccccggcagcggaaacggtggatcccgttccgcgc
gctttcctcaatgtcgaacgctccgtcggtgaccagcgctggatctcgcgcctggatcag
gcggcacaaaaccgcgcgctggcgatctcgcaggtgcacggtattccggaactcgtggcc
cgggtgctggcggggcggggggtatcgctggatgacgcacctgcattcctgaacccgacc
atccgcgccctgatgccagatccctacaccctgaccgactgcgagaaggctgtgtaccgg
ctgacgcgtgcgatcgaccgcggggaaaaagtggcgatctttggcgactacgacgtcgac
ggcgcctcgtcctccgcccttctgtatcgcttcctgcggcattttgatgtcgaggcggaa
atctacatcccggaccgcatattcgaaggctacggccccaatccatccgccatccgccaa
ctgatcgccaatggtgctggcctgatcgtcaccgtcgactgcggttcaaccagccatgag
gcgcttgctgcggcgcgcgacgagggctgcgatgtggtggtgatcgaccatcaccaactc
agccacgagctgccgccgtgccatgcgctggtcaacccgaaccgagaggatgatctgtcg
gggcaggggcatctgtgtgctgccggcgttgtcttcatggtgctcgttggtgcggcacgg
ctgatgcgcgagcggggtgattcccgcgccaagtctcttgatctactcggctggcttgat
ctggtcgcgctggccaccgtctgtgacgttgtgcccctgaagggcctgaaccgcgcttac
gtggtgaagggactgcttgccgcgcgccacatgggcaaccaagggctagctgccttgttt
cgcaaggcgggtctaggcaggcccgtgacgccttatcatttcgggttcctcgtcgggccg
cgaatcaatgccggtggccggatcggtgacgccgctctcggaagccgactgctgacgctt
gatgacgcggtcgaggctgaggagattgccgggcgcctggacgacctcaaccgcgagcgg
caggccatggaggcggcgatgcttgcagaagcggagtccgaagtgctcgctgaatacggt
accggtgagaatgcctgtgtcatcgtggcggcgcgcgacagctggcacccgggaatcgtc
gggctcatcgcagcgcgcctgaaggagaagttcaagcggccagccttcgcgatctctttt
gatccttccggcaagggaaccgggtcgggccgctcgatcaatggcttcgacatgggacgc
atggtacgtgcggccgtcgaggaaggcctgctggtcaagggcggcggtcacgccatggca
gcgggcctcacggtcgagcgggcgaatctcgggcgactgcgtgccttcttcgaggagaag
tcgggggagagcgtgccggcgcttgtcgctaatcacgtactgaagatcgacggcgcgctt
tcggcctccggcgttacgctggacctctttgacgtgctcgaacaggcgggcccttatggc
tcgggccattcgcagccgatctttgcgattcccgcgcaccgcctgaaggacgctcggctc
gtcgggaccgcccatgtgaagattacgctggaagctgccgatggcgcacggcttgaagga
atcgcgttccgtgctgctgaaacgccgctcggcaacatgctgctcaattcgcgcggcagc
cagattcacgtggcaggttgcctgagcgcagaccagtggcagggaaatcgccgcattcag
ctccgcgtgctggacgcggctcgtgcaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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