KEGG   Nitrosomonas eutropha: Neut_1356
Entry
Neut_1356         CDS       T00393                                 
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
net  Nitrosomonas eutropha
Pathway
net03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:net00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Neut_1356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:net03400]
    Neut_1356
Enzymes [BR:net01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Neut_1356
DNA repair and recombination proteins [BR:net03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Neut_1356
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_22 PDDEXK_1 AAA_25 AAA_11 AAA_30
Other DBs
NCBI-ProteinID: ABI59604
UniProt: Q0AGC8
Position
1423463..1427149
AA seq 1228 aa
MSQNITPLDLFTLPLTGSHLIEASAGTGKTFTIAMLYVRLILGHQGEFAFSGGALTPPEI
LVVTFTEAATKELRDRIRARLTEAARLFRADPINAQSLNDTDPLQQLLFEYSPAEWAACA
RKLELAAEWMDEAAISTIHGWCNRMLREHAFDSQSLFTQELETDQTELRAEVVRDYWRIF
YYPLTLEEIVWINGYWKSPTELGKAVTPLLDYVDQLPDLSATDPSTIISASQENKQNLLT
KLKQPWALWADELQALLDAAEAAGQIDGRKLRADWYTNWLNKLRDWANDPAMDNVDIGKG
WERLTSEGIAKAWKKGTSPHHPAFDTIPVLKEALNNLPDPRIELLSHAACWIAKKFDTIR
KHRSQIGFNDLLTGLETALTGLYGERLAQVIRQQFPVALIDEFQDTDPVQYRIFEYIYEI
SSNRNDCALILIGDPKQAIYAFRGADIHTYLKARRAVEGRLYTLNTNFRSTQAMVDAVNH
CFASVENQADSRGAFLFRTGDGNPVPFLEVQANGRRDTFQIEGETLPAMLLAVSAQQMEL
SKTDYIEQMSALCATRIVDWLNDGKSAKAGFAGQDMSFRAVRPGDIAILVNNGNEAANIR
QALLQRGVRSVYLSDKDTVYATRQATEVHRWLAACAEPDNDRLLRAALSTTSLGLTLAEL
DALNTDEAAWEAQVIQFKGYRELWQKQGVLPMLRRILVDFKCGDRLLALKENLNGQSGER
ILTDLLHLAEILQQASFTLEGEHALIRFLAEQIAAPEGEADSKKLRLESDSDLVKVVTIH
KSKGLEYPLVFLPFICITRPIKNSDIPLKWHDDQGTLKISLAAHPEIMARADLERLREDV
RKLYVALTRACYLTWMGLAPIKNKSSAVGHLFRLKATPAEQYLDALQSFVQERPDFCVTD
KPDNNLEQYVAETRSAPPGEACRPLRMVRENWRISSYSALRVDGNVPSTRIAQEDTPQAE
NLLEEQLERSFISLQPVSEQPASVTIHHFFKGAEAGIFLHELMEWVANTGFTIVSSDETD
LRDTIERRCKMRHWETWVAPLVDWVKRMLSTSLPFGSIGICLNTLTVVKAEMEFWAEASN
VDLTLLDAAVIEQTLASRPRPHLTQSELNGMLKGFIDLVFQYDGRYYVADYKSNWLGATD
QDYTVAAMDEVIRANRYDLQYVIYLFALHRLLKSRLPDYNYEQHVGGAACLFVRGIDAPT
AGVHFERPPGTLMDTLDELFAGKTEGSA
NT seq 3687 nt   +upstreamnt  +downstreamnt
atgagccagaacatcacaccacttgatctctttaccctccctttgaccgggagccatctg
atcgaagccagcgccggtactggcaaaactttcactatcgccatgctctacgttcgcctg
atcctgggacatcagggggaatttgccttttccggtggcgcattgacacccccagaaatt
ctggtggtaacttttacggaggccgccaccaaggaactacgcgatcggattcgcgcacgt
ctgacagaagccgcccgcctctttcgagctgacccaataaatgcgcaatcactgaacgat
actgatccgctgcagcagttgctcttcgaatactcacctgccgaatgggctgcctgcgcc
cgcaaactggaactggcagctgaatggatggatgaggcagccatctcgaccattcatggc
tggtgcaaccggatgctgcgggaacatgcctttgatagccaaagtctctttacccaggag
ctagaaactgatcaaacagaattacgggcagaagtggtacgggactattggcggattttt
tactacccgcttaccctggaagagattgtctggattaatggttattggaaaagccctacc
gaactgggaaaggctgtcacccccctgctcgattatgtggatcaattgcctgatttatct
gctacggatccatcgaccattatcagtgccagccaggaaaacaaacagaatctactgacc
aagctcaaacaaccttgggcactttgggcagatgaattacaggcgctgcttgatgctgct
gaggcagccggccagattgatgggcgcaaactgcgtgctgactggtacaccaattggtta
aataagctgagagattgggccaatgatcccgccatggataacgtagacattggtaagggt
tgggagcgtttgacgtcggaagggatcgcgaaagcatggaaaaaaggtacctccccccat
catcccgcattcgacacaattcctgtgctaaaggaagcacttaataacctgcccgatccc
aggattgagctgctaagccatgctgcctgctggattgccaaaaaatttgacaccattcgg
aaacaccgttcccagatcggtttcaatgatctgctgaccggccttgaaaccgccctcacc
ggcctttatggcgagcggctggctcaagtcatccgccagcaatttccggttgcgctcatt
gatgaatttcaggataccgatcccgttcagtaccggatttttgaatatatttatgagatt
tccagcaatcgaaatgattgtgcactcatcctgatcggtgatcccaagcaggcaatctac
gctttccggggagcagatattcatacctatctcaaggcccggagagcagttgagggacga
ctctacacgctgaatacaaatttccgctcaacccaagcgatggttgatgctgtcaatcat
tgctttgcatctgttgaaaaccaggcggattctcgcggcgcattcctgttcagaaccgga
gatggtaaccccgtgcctttcctggaagttcaagccaatggtcgcagggatacattccag
attgagggagagacattgcccgccatgctgctggctgtttcagcccaacagatggaactc
tcaaaaaccgattacattgagcagatgtctgccctctgtgcaacccggatcgttgactgg
ttgaacgacgggaaatccgcaaaagccgggtttgccggccaggacatgtctttccgggca
gtcaggccaggggatatagccattttggtcaataacggaaatgaagccgccaacatccgc
caggctttgctgcaacggggcgtccgttcagtgtatttgtccgataaggacacggtttat
gccacccgtcaggcaaccgaagtccatcgctggctagctgcctgtgctgaacctgacaac
gatcgcctgctacgcgccgcgctgtccaccacatcgctgggcctcacgctagcagagctt
gatgctctcaatacggatgaagcggcgtgggaagcccaggtaattcaattcaagggctat
cgcgagttatggcaaaagcagggagtgctcccgatgctgcgccgcatcctggttgatttt
aaatgcggcgatcgcctgcttgcgctcaaggagaatctcaacggccagagcggagaacgc
atcctgactgacctgcttcatctggcagaaatattacagcaggcaagctttacgctggag
ggtgaacatgcgttgatccgttttctggccgagcaaattgctgcccccgagggggaagca
gatagcaaaaaactgcgtctggaaagcgatagcgatctggtgaaagttgtcaccattcat
aaatcaaaggggcttgaatatccgctggttttcttgccgttcatctgcataacccggcct
atcaaaaatagtgatatcccgctcaaatggcacgacgatcagggcacattaaaaatttcc
cttgctgctcaccccgaaatcatggcacgtgccgatctggaacgcctccgtgaagacgta
cgcaagctttatgtggcattgacgcgtgcctgctatctgacttggatgggcttggcaccc
atcaagaacaagtcaagcgcggttggtcatttgttcagattgaaagctaccccggctgaa
caatatcttgacgctctccagtcttttgtacaggaacgccctgatttctgtgtgacggac
aaaccggacaacaatcttgagcaatacgttgcagaaacccgatccgccccgccgggtgag
gcttgccgcccgctgcggatggtgagagaaaactggcgcatcagcagttattcggcgctt
cgggttgatggtaatgttccatccacgcgaatagctcaggaagatacaccgcaggcagaa
aatctcctggaagagcaactcgaacgctcattcatctcactacagcctgtttcagaacaa
ccggcaagcgtgaccattcatcattttttcaaaggagctgaggcgggcatctttctgcat
gaactgatggaatgggtcgccaacaccggctttactattgtatcgagtgatgaaaccgac
ttgcgtgacaccattgagcgtcgttgcaagatgcgccactgggaaacctgggttgcacca
cttgttgactgggtcaagcgcatgctgtccacatccctgccgtttggctcaattggaatt
tgcctcaatacgctgactgttgttaaagccgagatggaattctgggctgaagccagcaat
gtcgatctgactctactggatgccgccgtgatcgaacagacactggcaagtcgcccgcgc
ccgcatctgacacagagtgagttaaacggaatgctcaagggttttatcgatctggttttt
caatatgatgggcgctattacgttgcggattacaagtcaaactggctcggtgccacagat
caggattacactgtggctgccatggacgaggtgattcgtgccaaccgttacgatctgcaa
tacgtcatttatctgtttgccttgcatcggctccttaaatcccgtctgcccgattacaat
tacgaacaacatgtgggcggtgccgcctgtctcttcgtgcgcgggattgatgcacccaca
gccggtgtccattttgaacgccccccgggaacgttaatggacacgctggatgagctattt
gccgggaagacagaaggtagcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system