KEGG   Candidatus Nitrososphaera evergladensis: NTE_02445
Entry
NTE_02445         CDS       T03224                                 
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nev  Candidatus Nitrososphaera evergladensis
Pathway
nev03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NTE_02445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nev03021]
    NTE_02445
Transcription machinery [BR:nev03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NTE_02445
 Prokaryotic type
  Archaeal type
    TFB
     NTE_02445
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Sigma70_r4 Cyclin_N HTH_DeoR HTH_11 HTH_36 LysW-like_globular RB_B
Other DBs
NCBI-ProteinID: AIF84495
UniProt: A0A075MTG8
Position
complement(2009069..2009971)
AA seq 300 aa
MVMRVSMLCSVCNNGVPVTDPELGEVVCSSCGRVLSDKTLDSRPKWYSFDAEKNNGAGTG
SPISLTQHDMGLATMISRANRDSSGRRLDASTHATMQRLRRWDFRTKTNPSRVMAFDGLS
GLKAKLGLSDSIVEKTAYIYRKALEKQLMKGRSTSSVLVAAAYIACREAGVSRTLKDISE
ITYVKRKEISRSYRALVRELDIKVPLADPKRWIGTIANKARVSEKTKRMALTTMDSVVEK
GASAGKNPTGIAATVLYMCCLRNKEGATLKSIAEVAGVTEVTIRNNLNYLRLRGVRVAEI
NT seq 903 nt   +upstreamnt  +downstreamnt
atggtaatgcgagtgtcaatgctgtgttcggtgtgcaacaacggtgttcctgttactgac
cctgaattgggggaggtagtgtgcagtagctgtggacgcgtattatccgataagacactg
gacagccgtccaaaatggtactcttttgatgctgaaaagaataacggtgcgggaacagga
tctccaatatctcttacccaacacgatatgggactggccacaatgataagcagggccaac
agggattctagcggacgcaggttggatgcatccacgcatgcaacaatgcagaggcttaga
aggtgggattttagaacaaaaactaacccgagccgtgttatggcttttgacgggcttagc
ggattaaaggccaaacttggtctatcagattcaattgttgaaaagacagcatatatctac
agaaaagctctagaaaagcaactgatgaaggggagatcgacatcttctgtcctagttgcg
gctgcgtacattgcatgcagagaagcgggagtttcaagaactctcaaagacatatccgaa
atcacctacgtcaagaggaaagagatttcgagaagttatagggcacttgtccgcgagctt
gacatcaaagtacctctggccgatccgaagaggtggattggaacgattgcaaataaagca
agagtcagcgagaaaaccaaacgaatggcgttgaccactatggactctgttgtcgaaaaa
ggggcatcggcaggaaagaatcctacggggattgcagcaacagttctttacatgtgttgc
ctaagaaacaaagaaggtgcgaccctgaaaagtattgcagaagtggcaggagtaacagag
gtaactatccgaaacaacctcaattatttgaggctcagaggtgtcagagttgctgaaatt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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