KEGG   Nocardia farcinica IFM 10152: NFA_13920
Entry
NFA_13920         CDS       T00207                                 
Name
(GenBank) putative sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
nfa  Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfa03021]
    NFA_13920
Transcription machinery [BR:nfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NFA_13920
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_2 TPR_7 TPR_21
Other DBs
NCBI-ProteinID: BAD56237
NIH_Japan: nfa13920
UniProt: Q5Z004
Position
complement(1565536..1566768)
AA seq 410 aa
MTGADTAAAVAEHTARTSYGRLVAVLAAGCGDLTLAEDTLAEAFEQALRTWPRRGVPANP
EGWLLTVARNRQRDEWKSAGYRRSVPLDTEDPPVEGVALLDDLDADAIPDRRLALLFVCA
HPAVAAEARTPLMLQTVLGFDSSQVARAFAVSPAAMQQRLVRAKRRIRDARIPFVVPGRG
ALAERLPPVLEAIYGCHALTWREGTRSLAGEARYLAVTLATLLADEPEAWALAALTTLVA
ARNSPADTVFRPLDAQDPADWDPRLITEGEDYLRRAERPGAAPGRFQLEAAIHAVHCARL
TTGDTDWQALRTLYTALVAVAPTLGSRTAHAAVLGRTDSAEDGLCLLDRLPPERERFQPY
HATRADLLARAGRFAEAAAAYDTAATLTDDPAVREFLRARGAAVRGSPRR
NT seq 1233 nt   +upstreamnt  +downstreamnt
gtgaccggcgcggacaccgcggcggcggtggccgagcacaccgcgcgcacgtcctacggg
cggctggtcgcggtgctggccgccggttgcggcgacctgacgctcgccgaggacaccttg
gcggaggccttcgagcaggcgcttcgcacctggccccgccggggtgtgccggccaacccg
gagggctggttgctgacggtggcgcgcaaccgtcagcgcgacgagtggaagtcggcgggg
taccggcgcagcgtgccgctcgacaccgaagacccacccgtcgagggcgtcgcgctgctc
gacgacctcgacgccgatgccattccggaccggcggctggcgctgctgttcgtgtgcgcc
caccccgccgtcgccgccgaggcccgcacgccgctgatgctgcagaccgtgctcggcttc
gactcgtcccaggtggcccgggcgttcgcggtgtcaccggcggcgatgcagcagcggctg
gtgcgggccaaacgccgcatccgcgatgcccggatcccgttcgtggtgccggggcggggc
gcgttggccgagcggttgccgcccgtactggaggcgatctacgggtgccacgccctgacc
tggcgcgagggcacccggtcgctcgcgggtgaggcccgctacctcgcggtcacgctggcc
accctgctcgccgacgaaccggaggcgtgggctctggccgccctgaccaccctggtcgcg
gcgcggaacagcccggccgacaccgtcttccggccgctcgacgcgcaggaccccgccgac
tgggatccgcggctgatcaccgagggtgaggactacctccgccgggccgagcggccgggc
gcggcgccgggccgtttccagctcgaggcggccatccacgccgtgcactgcgcccggctc
accaccggcgacaccgattggcaggcactgcgcaccctctacaccgccctggtcgccgtc
gcccccactctcggcagccgcaccgcgcacgccgcggtgctcggccgcaccgactccgcc
gaggacgggctgtgcctactcgaccgcctgccgcccgagcgggagcggttccagccctac
cacgccacccgcgcggatctcctcgcccgcgccggacggttcgccgaagccgccgccgcg
tacgacacggcggccacgctgaccgacgacccggccgtgcgggagttccttcgggcgcgc
ggagcggcggtccgtggatcgccgcggcgctag

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