KEGG   Nocardia farcinica IFM 10152: NFA_7520
Entry
NFA_7520          CDS       T00207                                 
Name
(GenBank) putative ABC transporter
  KO
K14699  ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
nfa  Nocardia farcinica IFM 10152
Pathway
nfa02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    NFA_7520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nfa02000]
    NFA_7520
Transporters [BR:nfa02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    NFA_7520
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N ABC_ATPase AAA_21 AAA_16 AAA_22 AAA_29 AAA_30 AAA_23 AAA_25 RsgA_GTPase DUF3584 cobW AAA_24
Other DBs
NCBI-ProteinID: BAD55597
NIH_Japan: nfa7520
UniProt: Q5Z1U4
Position
811076..812812
AA seq 578 aa
MIRTVLGLVPAEFRHLTPKMFAAIVAQALCQALAYLLLVPVLEALFGDDLGRAWLWALGM
LAAVAGVVVFGYLSAAIGLRIGIGMQRGLQTRIGDHLNALPLGWFETRDAGPLSRLIVEN
VREVQGLIAYLLAKVLTGVIVPLGVAVGMLFVDWRISLAMLLAAPVLYAVNGFANRAYTG
ADRRMHEAAAEADSRVVEFAQAQPVLRAFGAVGASNRALDAALSGQRSAGRKMIAASVPG
LILFALFVQAVFLVLVYVAVGRVTGGAVSAAAAIALIAVSSRFIEPLNQAAQLGNALRSA
AAAAERIGDLLAQPVLPEATAPVTPGSPSVVFDNVSFGYRPGEPVLSEITFSVPAGTTTA
IVGPSGAGKTTLLRLAARFYDVDSGRVAVGEHDVRDQPSATLLDQLSLVFQNVYLFDRSV
ADNIRIGKPDATDEEVRRAAEAARVDEIVERLPEGYDTRVGEGGATLSGGERQRVSIARA
LLKDAPIVLLDEATSALDPHSEAAVVRGIHELTREATVIVVAHRLATIAHADQILFLEGG
RIVERGTHEELLALDGRYARFWNERSRAAGWRLEPAAV
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgatccgcaccgtgctcggtctggtcccggccgaattccggcacctgaccccgaagatg
ttcgccgccatcgtcgcccaggcgctgtgccaggcgctggcctacctgctactggtgccg
gtgctcgaggcgctgttcggtgacgacctcggccgcgcctggctgtgggcgctgggcatg
ctggccgcggtggccggtgtggtggtgttcgggtacctgagcgccgcgatcgggctgcgc
atcggcatcggcatgcagcgcggcctgcagacccgcatcggcgaccacctgaacgcactg
ccgctgggctggttcgagactcgcgacgccgggccgctctcgcggctgatcgtggagaac
gtgcgcgaggtccaggggctgatcgcctacctgctggccaaggtgctcaccggggtcatc
gtgccgctgggggtcgcggtgggcatgctgttcgtggactggcggatctcgctggcgatg
ctgctggcggcgccggtgctctacgcggtgaacggctttgccaaccgcgcctacaccggc
gccgaccggcgcatgcacgaggccgccgccgaagccgactcccgggtggtggaattcgcg
caggcgcagccggtgctgcgggccttcggcgcggtcggtgcgagcaaccgggccttggac
gcggcgctgagcgggcagcgctcggccgggcggaagatgatcgcggccagcgtgccggga
ctgatcctgttcgcgctgttcgtgcaggcggtgttcctggtgctggtgtatgtggccgtc
ggccgggtcaccggcggggcggtgtcggcggcggccgcgatcgcgctgatcgcggtgagt
tcgcggttcatcgagccgctgaaccaggccgcgcagctgggcaacgcgttgcgttcggcg
gccgccgcggccgagcggatcggcgacctgctcgcccagccggtgcttcccgaggccacc
gcgccggtcacgccgggctcgccctcggtggtcttcgacaacgtctccttcggctaccgc
cccggtgagccggtgctgtccgagatcaccttcagcgtgcccgcgggcaccacgaccgcg
atcgtcgggcccagcggcgcgggtaagacgacgctgttgcggttggccgcgcgtttctac
gacgtggactccggccgggtggccgtcggcgaacacgatgtgcgcgaccagccctcggcg
accctgctggatcagctgtcgctggtgttccagaacgtctacctgttcgaccgctcggtg
gccgacaacatccgcatcggcaaacccgacgccaccgacgaggaggtgcgccgcgcggcc
gaggccgcccgggtggacgagatcgtcgaacggctgcccgagggctacgacacccgggtc
ggcgagggcggcgcgacgctgtccggtggtgagcggcaacgggtctcgatcgcccgcgcg
ctgctcaaggacgcgccgatcgtgctgctcgacgaggccaccagcgcactcgacccgcac
agcgaggcggcggtcgtgcgcggcatccacgagttgacccgcgaggccaccgtcatcgtg
gtcgcgcaccggctggccaccatcgcgcacgccgatcagatcctgttcctcgagggcggc
cgcatcgtcgagcgcggcacgcacgaggaactgctcgcgctggacggtcggtacgcgcgg
ttctggaacgagcgatcgcgggccgcgggctggcggctggaacccgccgcggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NIH_JAPAN (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (35)   

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