KEGG   Aspergillus fischeri: NFIA_025110
Entry
NFIA_025110       CDS       T01070                                 
Name
(RefSeq) topoisomerase family protein TRF4, putative
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
nfi  Aspergillus fischeri
Pathway
nfi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NFIA_025110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfi03019]
    NFIA_025110
   03016 Transfer RNA biogenesis [BR:nfi03016]
    NFIA_025110
Enzymes [BR:nfi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     NFIA_025110
Messenger RNA biogenesis [BR:nfi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     NFIA_025110
Transfer RNA biogenesis [BR:nfi03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    NFIA_025110
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Mito_fiss_reg
Other DBs
NCBI-GeneID: 4588215
NCBI-ProteinID: XP_001261336
UniProt: A1DC79
Position
Unknown
AA seq 701 aa
MPPAFEFRGNDRRSHNNNNPRREFTFRYARPGTAERPLLTTKRETTPEPILGATTGDEKP
GMKFAPISSLSDSEEAEMDMSDDDKDDEASHPRKKRALGTNTAIAPTPAPVTAPKWSNPD
PYTVLPPPDETLAKRVDVVKLIRKARIAENAKQTAPADAVTTNEDFISFSGLIDEEEARM
KVPDNAPSGPKRLQGRDSALGSRKRTHDDEIKGYSKKTGRPMVRFYDDGSIIDEWRARSQ
EDATPWMLLMEPSLHLGSRLHNEILSFYHWVKPMQYEQIVRADLITRLQVAFQSRYYGVQ
LRPFGSFASGLYLPTADIDLVLLSSNFMRNGIKTFGERKGQIYAFAAFLKNLEIAVPNSI
ETIAHARVPILKFVDKMTGLRVDLSFDNDSGLIANNTFQNWKSEYPAMPVIVAVVKQFLL
LRGLNEVPTGGLGGFSITCLVTSLLQHLPHGHAAPNLGSILMDFFEFYGNTFDFENVGIR
LNPPGYFNKRVYKGFQGNNDARLSIEDPNNPDNDVSGGTREIHLIFRSFSRAFQLLKEHM
VSSAVSGDTKASILQSIIAANYEEYAQQRSQLRAVFETHPRFAQYRRAPTPPPPPPESPP
PPPADLAPLPPNLPAKPPSAKSSKAPPAPASKDSKDSKEKMTKLQRKQQASRERAARLRR
LRPDIPAIPNSISNEQALSLGGYKTQSEMDRDLASREKETK
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgccgccagctttcgagtttcgaggcaacgaccgacggtcgcacaataacaataatcca
agacgcgagttcactttccgatatgcacgacctgggacggccgaacgaccgctcttgact
accaaaagagaaaccactccagagcccatcttgggcgctacaacaggagacgaaaaaccg
ggcatgaaatttgcgcccatttcaagcctcagtgacagcgaggaagccgagatggacatg
tccgatgatgataaggacgacgaggcttcgcatccgcgtaagaagcgtgcgctaggaaca
aatactgcgattgctcctactcctgcaccagtcacagctccaaaatggtccaacccagat
ccttacactgtcctacccccgcctgatgagacgttggcgaagagggtcgatgtcgtcaag
ctgattcgcaaggcgcggatcgctgagaacgctaagcagacagcacctgcggatgcagtg
acgaccaacgaggactttatatccttcagtggcttgatcgacgaagaagaagccaggatg
aaggtgccggacaatgctccttcgggaccgaaacgtctgcaaggaagagactctgctctc
ggaagccggaagagaacacacgatgacgagataaagggctattccaagaagaccggacga
cccatggtcagattttacgatgatggctcgattattgacgagtggagagcgcgctcgcaa
gaggatgcaactccttggatgttgctcatggaaccttccttgcacctgggttctcggctg
cacaacgaaatactgagtttctaccactgggttaaaccgatgcagtatgagcagattgtc
cgagcggatttgattacaaggctgcaggtagcattccaaagtaggtactatggtgtgcaa
cttcgtccgttcggctcgttcgcttctggcttgtatttgcccaccgcggatatagatctt
gtcctgctgtcatcaaatttcatgcgcaacggcataaagacttttggtgagcgtaaaggg
cagatctacgctttcgcggcctttctcaaaaatctcgaaatcgccgttcccaattcaata
gagaccatcgcgcatgcgcgcgttccgattctcaagtttgtggacaagatgaccggcttg
cgggttgatctgtcgtttgacaatgatagcgggctcatcgccaacaacacatttcaaaac
tggaaatcagaatatccggcgatgcccgtgattgtagcggtggtcaagcaatttctgcta
cttcgtggccttaatgaggtcccaactggtgggctgggagggttctccataacctgcctc
gtcaccagtcttcttcagcatctaccacatggtcacgcagcgcctaatctgggcagcatt
ctcatggattttttcgaattctacggcaacactttcgacttcgagaatgttggtattcgc
ctgaatccgccgggttatttcaacaagagagtgtacaaagggttccaagggaataacgat
gctcgtttatcaatcgaggatcccaacaacccggataacgatgtgtcgggtgggactcgg
gaaatccatctgatcttcaggtcattctcaagggcattccaactgcttaaggaacatatg
gtctcctcggcggtgtctggcgacacaaaagccagtattctgcaaagcatcatcgctgca
aattatgaggagtacgcacagcagcgttcgcagctacgtgcggtttttgagacccatccc
agatttgcacagtatcgtcgagctcccacacctccaccacctcccccagagagtcctcct
ccacctcctgccgaccttgctcccctgccacctaatctgcctgctaaacctccttcagcg
aaatcctccaaagctcctccagcgccagcatccaaggactccaaggactcgaaggagaag
atgaccaagttgcaaagaaagcaacaagcatcgcgagaacgggccgctcgtcttagacgt
ttgcgccccgatatacctgctattccaaactccatcagtaatgagcaagccttgagtcta
ggtggttataaaacccaatctgagatggacagagatctcgcaagtcgagaaaaagagacg
aaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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