KEGG   Aspergillus fischeri: NFIA_073070
Entry
NFIA_073070       CDS       T01070                                 
Name
(RefSeq) RNA annealing protein Yra1, putative
  KO
K12881  THO complex subunit 4
Organism
nfi  Aspergillus fischeri
Pathway
nfi03013  Nucleocytoplasmic transport
nfi03015  mRNA surveillance pathway
nfi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NFIA_073070
  09122 Translation
   03013 Nucleocytoplasmic transport
    NFIA_073070
   03015 mRNA surveillance pathway
    NFIA_073070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfi03019]
    NFIA_073070
   03041 Spliceosome [BR:nfi03041]
    NFIA_073070
Messenger RNA biogenesis [BR:nfi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NFIA_073070
    TREX complex
     NFIA_073070
Spliceosome [BR:nfi03041]
 Complex C
  Other components
   EJC/TREX
    NFIA_073070
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NFIA_073070
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 4586350
NCBI-ProteinID: XP_001259289
UniProt: A1DDD5
Position
Unknown
AA seq 275 aa
MSAKLDKSLDEILVNRRQNARRRTRRPAASKPGSAAVPVGGVKKNAKAAKPVAKGAQGGH
PVATESKIMVSGLPSDVNEANIKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTA
AKAAKELNGLLVDGRPMKIEVVVDASHAPSVPAPKPLTERVAQVKSQPKPATAAKAANTT
RGRGARRGRRGGARSSNRPKPKTVEELDAEMVDYFASTENTGAADANAPAATNGAVQQPA
AGGEDLGMAEISVSFPGSLCSLDVQTLTPHAVNVS
NT seq 828 nt   +upstreamnt  +downstreamnt
atgtctgccaagctggacaagtctctcgacgagatcctcgtcaaccgtcgtcaaaacgct
cgtcgccgcactcgtcgtccagccgcttcaaagcctggcagtgctgccgttccagttgga
ggagtgaagaagaatgcaaaggccgccaaacctgttgcaaagggcgctcagggtggacac
ccggtcgcaacagagagcaagatcatggtcagcggcttgccctctgatgtgaatgaggcc
aatatcaaggaatacttctcaaaatccgcaggtcccgtcaagcgagtgatgctcacttac
aaccagaacggcaccagccgtggtattgcttcgattgtcttcagcaaacccgacacagcc
gccaaggctgccaaggagttgaatggccttcttgttgatggaagacccatgaagattgaa
gtagtggttgacgcttcccacgctcccagcgtgccagcacccaagcctcttacagagcgt
gtcgctcaagtcaaatcccagcccaagcctgccacggccgccaaggccgccaacaccact
cggggccgtggcgcccgccgtggccgccgtggtggtgcccgtagctcgaaccgtcctaag
ccgaagaccgtcgaagagctcgatgccgagatggttgactactttgccagcaccgagaat
actggcgccgccgatgccaatgcccctgccgctacaaacggcgctgttcagcagcctgct
gccggtggtgaggatcttggaatggccgagatttctgtaagcttccctggttctttatgc
tcactggacgtacagacactgactcctcatgcagtaaatgtctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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