KEGG   Aspergillus fischeri: NFIA_087400
Entry
NFIA_087400       CDS       T01070                                 
Name
(RefSeq) chromosome transmission fidelity factor
  KO
K10754  replication factor C subunit 1
Organism
nfi  Aspergillus fischeri
Pathway
nfi03030  DNA replication
nfi03410  Base excision repair
nfi03420  Nucleotide excision repair
nfi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NFIA_087400
   03410 Base excision repair
    NFIA_087400
   03420 Nucleotide excision repair
    NFIA_087400
   03430 Mismatch repair
    NFIA_087400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nfi03032]
    NFIA_087400
   03400 DNA repair and recombination proteins [BR:nfi03400]
    NFIA_087400
DNA replication proteins [BR:nfi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    NFIA_087400
DNA repair and recombination proteins [BR:nfi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     NFIA_087400
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 AAA_16 Rad17 AAA_33 RuvB_N nSTAND3 AAA_30 AAA_14 AAA_28 DNA_pol3_delta BRCT_2 AAA_18 NACHT AAA_5 AAA_11
Other DBs
NCBI-GeneID: 4587239
NCBI-ProteinID: XP_001260681
UniProt: A1DHC7
Position
Unknown
AA seq 1064 aa
MPTDIRNFFGGQGSSASPAKPPAKKEDASTARKKRSRKVVDDSDEEEELKPKSPAPKSRA
TSTPKPAESQGQPTTTSDYFASSKRKTKPGKSEDVTKTKEVRPSDTASLNGRDAEDASET
KNKKTADQSPRQRSRRTAKKSTVVLDDDDGLGNDDIFATDYRKPGKYDDDYVEEDEHDGD
DDYEEMEVKPASAASGKSSRRKNASAAESADVAMKDAPAEPERASRTGQKRKSAAVDRDG
DYEDCKTSEGPVRARAAPSAPAAKKQRGAATKKDEPESKEIQDIFDSIPTIKPPSPPPPS
GEKAKFNFAATQRSRDPVAGGTAELPVGAENCLAGLSFVFTGVLDTLGREEGQNLVKKYG
GKVTTAPSSKTSYVVLGSDAGPNKLKKIQEHNLRTINEEGLFELIRRLPPNGGDSKAAEK
HAAKKKVEEVKIKAMAAEMEAEEKRKLKAKGTMTPKASAGSQAPSAFQGAKVDDQLWTTK
YAPTAMNMICGNKGAVEKLQTWLHNWHKNAKFNFSRPGKDGSGVYRAVMIHGPPGIGKTT
AAHLVANLEGYDVVETNASDTRSKKLVESNLLDILDTTSLQGYFSGEGKKIESTKKNLVL
IMDEVDGMSAGDRGGVGALVSLAKKTHIPLILICNERRLPKMKPFDHVTYELPFRRPTAE
QIRARLSTICFREGLKIPPPVLDSLIEGTNADIRQVINMLSTVKLDQQHLDFDKGKEMSK
AWQKHVILKPWDIVSKILNAQTFSPSSKTTLGDKIELYFNDHEFSYLMLQENYLRTRPTL
AGNYQGKEQKLKLLELADNAASSISDGDLVDRMIHGTQQQWSLMPTHAVFSFVRPASFIY
GNMVERPGFTSWLGQNSKQGKLWRYVKEIQGHMRLRASGDRDEIRQQYIPLLWNKLVRRL
MDEGKDSVEDVIDFMDSYFLTRDDWDALVELGLGPMDESNVKLETQTKATFTRLYNQRSH
PLPFMKASSVAAPKKMAKEKPDIEDAIDESDEAEVLEDDAQDNDENEELDLKKDKYVRVP
KKSAAQKGASGKGKKGKKANPDDDFIDDDEKPKKGKGRKTKAKA
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgcctaccgacattaggaacttcttcggtggccagggctctagtgcgtctcccgcgaaa
ccgccagcaaagaaagaggatgcatcaaccgctaggaagaaacgaagcagaaaggtggtc
gatgacagtgatgaagaagaggaattaaaacccaagtcacctgcgccaaagtcaagggca
acgagcacgcctaaaccagctgagtcccagggccagccgacaaccacttcggactatttt
gcgtcctcaaaaaggaaaacaaaacctggcaaaagcgaagacgtgacgaagactaaggag
gtccggccttctgatactgcatctctcaatggccgtgacgctgaggacgcttctgaaacg
aagaacaaaaagaccgccgaccaatcacccagacaacgctctcgcaggacggccaagaag
agcacagttgttctggacgacgacgatggcttaggaaatgatgacattttcgcgacagac
tatcgaaaaccaggtaaatacgacgacgactacgttgaagaggatgagcacgacggagat
gatgactatgaggaaatggaagtcaaaccggccagtgcggcttccggcaagtcatcgcgc
agaaagaacgccagtgcagccgagtcagccgacgtggccatgaaggacgcaccagcagaa
cccgaaagagcctcgcgcacaggccagaaacgaaagtctgcggccgttgaccgggatgga
gattacgaggattgtaaaacctcggaaggtcctgtgcgcgcaagagcagccccatcggcg
cccgctgccaagaaacagagaggagcggctactaaaaaggacgagcctgagagcaaggaa
atccaggatatattcgacagcataccgaccatcaaaccaccctccccaccaccgccatca
ggtgagaaggcgaaattcaactttgctgctacgcaaagatcgcgagatcctgtagcaggc
gggaccgcagaattgcccgttggcgctgaaaactgcctggctggattatcatttgtcttc
acgggtgttcttgataccctcggtcgcgaagaaggacagaacttggtcaaaaagtacggt
ggcaaagttaccacagcacctagctcaaaaaccagctatgtggttttaggaagcgatgct
ggacccaacaagctcaaaaagattcaggagcacaacttgagaactatcaatgaggaaggg
ctgtttgaacttatccgccgactccctcccaatggtggggactcaaaggcagctgagaaa
catgcggcgaagaagaaagtcgaagaggtcaaaatcaaagcaatggccgctgaaatggaa
gcagaagagaagcggaagctcaaggctaagggaacaatgacacctaaagcatctgcaggg
tctcaagctccctcggcgtttcaaggcgccaaggttgatgaccagctatggactacgaaa
tatgccccgacggccatgaatatgatatgcggcaacaagggtgctgttgagaagctccaa
acttggcttcataattggcacaagaatgccaagttcaacttttcaaggcctggaaaagat
gggtctggggtctatcgcgccgtgatgatccatggacctcctgggatagggaaaacgacg
gcagcgcatctggtagctaaccttgaaggctatgacgtcgtcgaaacgaacgcgagtgat
acaaggagtaagaagctcgtggaaagcaatcttctggatatcttagacacaacctccctg
caaggttatttttccggcgaaggcaagaagatcgagagcacgaaaaagaacctggttctc
ataatggatgaagttgacggaatgtctgctggagatcgaggtggtgtgggcgctttggtt
tccctggcgaagaaaacccacatacccttgattctaatctgcaacgagcgaaggttgccg
aaaatgaagcccttcgatcacgtcacttatgagttgccgttcaggcgcccgacagccgaa
caaatcagagccagactctcgactatctgcttcagggaaggcttaaagattccacccccg
gtattggatagtctcattgaaggaaccaacgccgatattcggcaagtcatcaacatgctt
tccacagtcaaattagaccagcaacatcttgactttgacaaaggaaaagagatgtccaaa
gcatggcagaagcatgtgatcctgaagccgtgggacattgtcagcaagatcttaaatgcc
cagaccttctctcccagctctaaaaccactctgggtgacaaaatcgagctgtacttcaat
gatcacgagttcagttatctgatgcttcaagagaactacctgagaaccagaccaacgcta
gctggcaattaccagggcaaggaacagaagctgaaactgcttgaattggcggacaatgct
gcctctagtatcagtgatggcgatctggtcgataggatgattcatggaacgcagcagcaa
tggagccttatgccgactcatgctgtgttcagttttgttcgccccgcaagctttatttac
ggcaatatggtggagcggcccggtttcaccagctggctggggcagaacagtaaacaaggg
aaactctggcgttatgtcaaggaaattcaaggccacatgcgtcttcgtgcttctggtgac
cgcgatgagatcagacagcaatacatcccgctcctctggaacaaattggttcgcagattg
atggatgaaggcaaagacagcgttgaagacgtcattgacttcatggacagttatttcctc
acgcgcgacgactgggatgctctcgtcgagcttggcctgggtcctatggacgagtccaac
gtcaagctggaaacacaaacaaaagccacctttacacgtttatacaaccagcgatcgcat
ccactgccattcatgaaagccagcagtgttgcggctccgaagaagatggcgaaggaaaag
cctgacatcgaagatgccattgatgaatcggatgaggcagaggtcctcgaagatgacgca
caggataacgatgaaaacgaagaacttgatctgaagaaggacaagtatgtccgtgtgccc
aagaaatcagcggcgcagaaaggcgcgtcaggcaaaggcaaaaagggtaaaaaagcgaac
cccgacgacgattttatcgacgatgacgaaaagcctaagaaaggaaaaggccgaaagact
aaggcaaaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (33)   

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