KEGG   Nocardia farcinica NCTC11134: ERS450000_05497
Entry
ERS450000_05497   CDS       T04524                                 
Name
(GenBank) CRISPR-associated protein Cas5/CasD%2C subtype I-E/ECOLI
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
nfr  Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:nfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nfr02048]
    ERS450000_05497
Prokaryotic defense system [BR:nfr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    ERS450000_05497
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: CRY83443
UniProt: A0A0H5P7J0
Position
p2:2160878..2161570
AA seq 230 aa
MRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAFGVRVD
QPGRLIRDFQVALNIDKTKPFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRPEFPLY
LGRRSCPVTGPLVLGEPRDITLEHALHETEWQAATWYRRSQHRRVRLPIYRDLLPGDPAE
LLREQVRDMPLSFDPIRREYGWRTVVEDYTTMLNAEGRTGHEPLAALGGD
NT seq 693 nt   +upstreamnt  +downstreamnt
atgcgactggccgcccccttgcaatcctggggcgtcgccagccggttcgcacgcagggaa
acccagcagtatccgtcgaagagcggcattctcggactcatcgccgcggcgcgcggacac
cgtcgcaccgatccgatcgaagaagcgctgcagaacctggccttcggagtgcgggtggat
cagccgggccggttgatccgcgattttcaggtcgccctgaacatcgacaagaccaagccg
tttccgctgtctcagcgctactacctggccgacgcggtgtttctcgccgcgattcaaggt
gagcgcggtctgatcgaaggaatcggaaatgccctgcggcgcccggagtttccgctgtac
ctgggtaggcgctcctgtccggtgacagggccgctcgttctcggcgagccccgcgacatc
acgttggaacacgccctgcacgaaaccgaatggcaggccgcgacgtggtatcgacgttcg
cagcaccgacgcgtccggctgccgatctaccgcgacctcctgcccggcgatcccgcagaa
ctcctgcgtgagcaggttcgcgacatgccactcagcttcgatccaatccgtcgcgagtac
ggctggcgcactgtcgtggaggactacaccacgatgctcaacgcggagggccgcaccgga
cacgagccgctcgcggccctgggaggtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

Download RDF
DBGET integrated database retrieval system