KEGG   Nothobranchius furzeri (turquoise killifish): 107372352
Entry
107372352         CDS       T05163                                 
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107372352 (gtf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfu03021]
    107372352 (gtf2b)
Transcription machinery [BR:nfu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     107372352 (gtf2b)
 Prokaryotic type
  Archaeal type
    TFB
     107372352 (gtf2b)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Cyclin_C RB_B Sigma70_r4 Auto_anti-p27
Other DBs
NCBI-GeneID: 107372352
NCBI-ProteinID: XP_015796042
UniProt: A0A1A7ZIS6
Position
Unknown
AA seq 318 aa
MASTSRGEGLTLPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGADLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLHAF
KEISNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcgtcgacgagccgcggtgaaggtctgaccctgcccagggttacgtgccccaaccac
cctgatgccatactggtggaggactacagagcaggagacatgatctgtcctgaatgtggc
cttgttgttggtgaccgtgtgatcgacgtgggctcagagtggaggacgttttctaacgag
aaagctctcaaagatccgtccagagtgggcgacgcccagaaccctctgctgaacggagca
gacctcactaccatgatcagcaagggaactggtgctgccagctttgacgagtttgggaac
tccaagtatcagaaccgacggaccatgagcagctctgaccgggccatgctgcacgccttt
aaagagattagcaacatggcggaccggatcaaccttccgaggaacatcgtagacagaaca
aacaacctgttcaagcaggtttacgagcagaagagtctgaagggccgagccaacgacgcc
atcgcctccgcctgcctctacatcgcctgcagacaggagggggtgcccagaacctttaaa
gagatctgcgccgtctctcggatctcaaagaaggagataggtaggtgcttcaagctgatc
ctgaaggctctggagaccagtgtggacctgatcaccaccggtgatttcatgtcccgattc
tgctccaacctgggcctgcccaagcaggtgcaaatggctgccaccttcatcgccaggaaa
gctgtggagctcgacctggtacccggcaggagccccatctcagtggctgctgcagccatc
tacatggcctctcaggcctctgcagagaagaagactcagaaagaaattggtgacattgcc
ggcgtggcagacgtcacaatcagacagtcttaccgactcatctacccacgtgccgcagag
cttttccccccagacttcaaattcgacacacctgtggacaagctgccccagctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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