KEGG   Nothobranchius furzeri (turquoise killifish): 107377116
Entry
107377116         CDS       T05163                                 
Symbol
ppp2r5b
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015  mRNA surveillance pathway
nfu04110  Cell cycle
nfu04114  Oocyte meiosis
nfu04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107377116 (ppp2r5b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    107377116 (ppp2r5b)
   04114 Oocyte meiosis
    107377116 (ppp2r5b)
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    107377116 (ppp2r5b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nfu01009]
    107377116 (ppp2r5b)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107377116 (ppp2r5b)
   03036 Chromosome and associated proteins [BR:nfu03036]
    107377116 (ppp2r5b)
Protein phosphatases and associated proteins [BR:nfu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107377116 (ppp2r5b)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107377116 (ppp2r5b)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107377116 (ppp2r5b)
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 107377116
NCBI-ProteinID: XP_015802023
Position
sgr04:complement(23140411..23205072)
AA seq 504 aa
METTKLPPSSPSSPTTSFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTPL
PLLKDAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGVLI
EPLYPEAIKMVRLRVRVGQMITCCFCLLQLVYEFFLRFLESPDFQPSMAKRYIDQKFVLQ
LLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLRFIYETEHFNGVAELLE
ILGSIINGFALPLKAEHKQFLVRVLIPLHTAKSLSIFHAQLAYCVVQFMEKDATVTEYII
RGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRIQEPLFKQIAACISSPHFQVAERA
LYFWNNEYILSLIEENCQVILPLVFATLYRVSKEHWNQTIVSLIYNVLKTFMEMNSKLFD
DLTASYKVEKQKEMKRERERAELWRGLEEYQERRVQMLTEAARNQRNLQERGERGDPLSP
SSPHSDQPEPKPSGANSGAGESAT
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggagacgaccaagcttcctccgtccagcccgtcctctccgaccaccagcttctcggtg
ccatccgcggaaaaggtggacggcttcccgcggaggtcgatgcgtagagcgcggcagagg
aggtcccacagctcgtctcagttccgctaccagagctcccaggtggagctgaccccactg
cccctgctcaaagacgccccggtggcagagctccatgacctgttctgtaagaagctgcag
cagtgctgcgtgctgttcgatttcctggactgcgtggccgacctgaaagggaaggagatc
aaacgtgcggcgcttaacgagctggtggagagcgtggccactagcagaggagtcctcata
gagccgctctaccctgaggcgataaagatggtaaggttacgggttagggtgggtcagatg
atcacgtgctgcttttgcctccttcagttggtgtacgagttctttctgcggttcctggag
agtccggacttccagccgtccatggccaaacgctacatcgaccagaagtttgtcctgcag
ctcctggagctgtttgacagcgaggacccaagggagagggagtacctgaagaccatcctg
caccgtgtttatggaaagttactgggtctccgagcctacatccgcaaacagatcaacaac
atcttcctcaggttcatttatgaaactgagcacttcaatggcgtggcagagcttctggaa
atccttggcagcatcataaatggcttcgcgctgccgctgaaagccgaacacaagcagttc
ctggtccgagtcctcatccctctacacacagcaaagtccctctccatcttccatgcacag
ctggcctactgtgtggtgcagtttatggagaaagacgctacggtgactgaatacatcatc
agagggctgctcaagtactggccgaagacctgcacccagaaagaggtgatgttcctgggg
gagattgaggagattttggacgtgatagaaccatcacagttcatccggattcaggagcct
ctcttcaaacagatagcagcctgcatctccagccctcacttccaggtagcagaacgagct
ctgtacttctggaacaacgaatacatcctcagcctaatagaggagaactgtcaagtcatc
ctgccgctggtgttcgctaccctctacagagtctccaaggagcactggaaccagaccatc
gtgtctctgatctacaacgtgctgaagaccttcatggagatgaacagcaaactgtttgat
gacctcactgcctcctacaaagtggagaaacagaaggagatgaagcgggaaagggagcgt
gccgagctctggcgaggcctggaagagtaccaggagcgccgggtgcagatgctgacagag
gcagccaggaaccagcgtaacctccaggagaggggcgagagaggcgaccccctgagccct
tcgtctccgcactccgaccagcctgagcccaaacccagcggggccaactctggagctggg
gagagcgccacctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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