KEGG   Nothobranchius furzeri (turquoise killifish): 107378057
Entry
107378057         CDS       T05163                                 
Symbol
psmc6
Name
(RefSeq) 26S protease regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03050  Proteasome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    107378057 (psmc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:nfu03051]
    107378057 (psmc6)
Proteasome [BR:nfu03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     107378057 (psmc6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 AAA_22 AAA_2 PRS7_OB RuvB_N nSTAND3 Prot_ATP_ID_OB_N AAA_14 AAA_18 DUF815 AAA_33 AAA_7 AAA_11 TIP49 RNA_helicase AAA_3 Mg_chelatase bpMoxR AAA_24 AAA_28 DUF5906 TsaE NACHT AAA_25 AAA_17 ATPase Parvo_NS1 ATPase_2 IstB_IS21 DUF3606 AAA_19 GAS
Other DBs
NCBI-GeneID: 107378057
NCBI-ProteinID: XP_015803560
UniProt: A0A1A8U933
Position
sgr04:62217734..62227651
AA seq 389 aa
MADTREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVGDSKKLESKLDYKPV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcggacaccagagagaaagcgttgcaagattacaggaaaaaattactagaacataaa
gaagtagacggacgattaaaagaattgagagaacagttaagggagcaaaccaaacagtac
gagaagtcagagaatgatctgaaggcacttcagagcgtcggacagattgttggagaggtg
ctgaaacagctcaccgaggagaaattcattgtcaaggccaccaacggtcctcgatatgtg
gtgggatgtcgcagacagctggacaagtcccagctgaagccaggcaccagagtggctctg
gacatgaccacactcacgatcatgaggtacctgcccagggaggtggaccccctggtgtac
aacatgtcccatgaagaccctggtagcgtctcctactctgagatcggaggactgtcggaa
caaatccgtgagctgagagaagtgattgagcttcctctgaccaaccctgagctgttccag
agggtgggcatcattcctcctaaaggctgcctgctgtatggacctccaggaactggaaag
actcttctagccagagctgtggccagtcagctggactgtaactttcttaaggtggtgtcc
agctccattgtggacaagtacatcggagagagcgccaggctcatcagagagatgttcaac
tacgccagagaccaccagccctgcatcatcttcatggatgagatcgatgccatcggagga
cgtcggttctccgagggaacatcagccgacagagagatccagaggactctgatggagctg
ctgaaccagatggacggttttgacacactacacagagtcaagatgatcatggccaccaac
aggccagacaccctagacccggccctgctgcggcccggaagactggaccggaaaatccac
atcgagctgccgaacgagcaggcccgcctggacatcctgaagatccactccagtcccatc
accaagcatggagagatagattttgaagccatcgtgaagctctctgatggttttaatgga
gctgatctcagaaacgtgtgcacagaagcaggactgtttgccatcaggtccgatcgagag
tacgtcactcaggaagactttatgaaagcggtgaggaaggttggcgactcaaagaagctg
gagtccaagttggactacaaacccgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (36)   
   Pfam (36)   
All databases (90)   

Download RDF
DBGET integrated database retrieval system