KEGG   Nothobranchius furzeri (turquoise killifish): 107379442
Entry
107379442         CDS       T05163                                 
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107379442 (emg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nfu03009]
    107379442 (emg1)
Enzymes [BR:nfu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     107379442 (emg1)
Ribosome biogenesis [BR:nfu03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107379442 (emg1)
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 107379442
NCBI-ProteinID: XP_015805682
UniProt: A0A1A8AAT3
Position
sgr05:complement(61000332..61001840)
AA seq 237 aa
MATPGKKRGFEHLDEYEPKAVKLGKNSFHDRMTEKRLVVILEGASLETVKVGKTFELLNC
DQHKNMILKSGRDPGHIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFTRFCGLMVQLLHKLSVRAADGSEKLLKLIKNPVSDHLPPGCPRIATSFSAGEPVCP
RTLVPEGPAAFVIGAFAHGSVNVDYTENIVSISNYPLSAALTCAKICSAFEEVWGVM
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcgactccaggcaaaaagcgtggttttgaacatttggacgaatatgaacctaaagca
gtcaagctaggaaagaacagttttcatgaccgaatgacagagaaaaggctagttgttatt
ctggagggagcgtcgttagaaacagtaaaggtaggaaagacgtttgagttgttgaactgc
gaccagcacaaaaatatgatcctcaaaagtggaagagacccgggacacattagaccagac
attacacatcagtgtcttctcatgctgatggacagtccgctgaacagggcaggcctttta
caggtttacatccacacagagaaaaacgcactaatagagatcaacccacagactcgaatc
cccagaacgttcactcgtttttgtgggctcatggttcagctgctgcacaagctgagtgtt
agagctgctgatggttctgaaaagcttttgaagctgattaaaaatcctgtttccgaccac
ctgccccctggctgcccccgcattgccacctccttctctgctggggaacccgtctgtcct
cggaccttggtaccagagggccctgcagcatttgtgatcggagcatttgcacatggatcg
gtgaatgtggactatacagagaatattgtttccataagtaattaccccctttctgcagca
ctgacctgtgccaaaatatgctctgcttttgaagaagtttggggtgtcatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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