KEGG   Nothobranchius furzeri (turquoise killifish): 107389346
Entry
107389346         CDS       T05163                                 
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
  KO
K10614  E3 ubiquitin-protein ligase HERC3 [EC:2.3.2.26]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107389346 (herc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nfu04121]
    107389346 (herc3)
Enzymes [BR:nfu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     107389346 (herc3)
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  HECT type E3
   107389346 (herc3)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2 EKLF_TAD1
Other DBs
NCBI-GeneID: 107389346
NCBI-ProteinID: XP_015820934
Position
sgr02:13964132..14002083
AA seq 1047 aa
MLCWGNARDGQLGIGVERHPVFEPRNCHVFSRRGLIEVACGGQHTLFLLHDGSVYTCGFN
GCRQLGHNKDGSFPELVGALDTQKITMVSCGWAHSMAVNEQGQVFAWGAGDRGQLGLGTA
ENAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTNGQLGLGKGEPSKLSP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHVKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQVAC
GRHHTLALVPSSSMVYAFGCNSQGQLGTGILGDARSPFPIKTSFLSGNLQRETKQYMVIK
IICGGDHSFLLYSNEQNSINPVDFRVINISKSLSPINYERLNSWRLKLMYNTDSSVANDI
VIQLSSAACWNASFLDQSDDTHFKTNPKIPGIDLNSVRVLFECLSKPAFSGLLEQASTSF
ESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDTNPSKVLDN
WWCFVDGNVFTRMVDTYKSIVVFMLTGGKTLLVPVFYDNYFLATLQLLEKLHKVNLKANH
VEYSHFYIPDVTSLVDIQEDYLKWFLSKAEIKVGSSPSQSDFPSVNLCAFPFILNAQAKT
TMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMYT
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKDSNLLWFSDTCFV
EQNWFHLIGVICGLAIYNSTVVDLHFPLALYKKLLDVLPKLEDFKELSPTEARSLQELLD
YEGEDVEEIFLLNFSITRENYGMVEVKELVPGGESIAVDKNNRKEFVEAYLRYVFTDSVS
EQYSAFSSGFLKVCGGEILALFQPSELMAMVVGNNNYNWEEMEKNAVYKGEFSATHPTVR
LFWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLLD
MPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgctgtgttgggggaacgccagggatgggcagttgggtatcggcgtggagaggcacccc
gtgttcgagccgaggaactgccacgtgttcagtaggcgagggctgatagaggtcgcgtgc
ggaggccagcacacactgttcctgctgcacgatggaagcgtgtacacatgcggctttaac
ggctgcaggcagctgggccacaataaagatgggtctttcccagagctggtgggtgctctg
gacactcagaagataacgatggtgtcgtgtggttgggcccattccatggcggtaaacgag
cagggccaggtgtttgcgtggggagccggtgacaggggacagctgggcctgggaacagca
gagaacgccgtccgaatcccaaggttggtgaaaagactctgtgatcacagcatctctcaa
gtgatgtgtgggaaccagcactgcatcgcactttctcgagatggccagctcttcacatgg
ggtcagaacaccaacggtcagctcggtctggggaaaggagagcccagcaaactgtctcct
catcctctgaagtctctggcaggaatccctctggcccagatcaccgctggaggagaccac
agctttgctctgtccttgtctggggctgtattcggctggggcaagaacagagccgggcag
ctcggcctcaacgacaagcaagatcgagctgttccatgtcacgtcaaattcttgagatcc
cagaaggttgtttacatcagctgtggagatgaacacacagcagccctcacaaaagatgga
ggtctgtttacgtttggcgacgggtcgtggggccagctaggtcacggatcgaccaataac
gagctcttaccgagacgagtgttggagctcatgggtactgaggtgtcacaggtggcctgc
ggcaggcaccacactctggcgttagtgccctcctccagcatggtgtatgcgtttggttgt
aatagtcaaggccagctggggacaggaatactgggagatgcgaggagcccatttcccatc
aaaacaagcttcctgagtggaaatctgcagcgagaaacaaagcagtacatggtgataaag
atcatctgtggaggagaccacagtttcctattatactccaatgagcagaattctatcaac
ccggtggacttcagagtgatcaacatcagtaaaagtttgtctcccatcaactatgagagg
ttaaactcctggaggttaaagctgatgtacaacacagactccagtgttgcaaatgatatt
gtaatccaactctcctctgcagcttgttggaacgccagcttcttggaccaaagtgacgat
actcacttcaaaaccaaccccaaaattccaggcattgacttgaactctgtcagagttctg
tttgagtgtctcagcaaaccggccttttctggactcctggaacaggccagcacgagcttt
gagagtctgttgattccccagctgccccgctcccctcctgacgttgaggccatgaggatc
tacctcatcctgtccgagtaccccgccctgcaggactccaagaactacatccgtctcacc
attcctctggcgatggcaattctccgactagacaccaaccccagcaaagtattggataac
tggtggtgttttgtggatggcaatgtgttcaccagaatggtggacacgtacaagagcatt
gttgtgtttatgctcacaggaggcaagacgctcttggtacctgtattctacgacaattat
tttttggccacactgcagctgctggagaaactccataaggtgaacctgaaggccaaccat
gtggagtacagccatttttatatccctgatgtcaccagcctggtggacatccaggaagac
tacctcaaatggtttctgagtaaagccgagattaaagttggatcatctccttcacagagt
gactttccctccgtaaacctctgtgcctttccgttcatcttgaacgctcaagccaagact
acaatgctgcaaacagatgctgaactgcaaatgcagatggcagtgagtggtgcaaacttg
cacaatgtctttatgctgctcacactggaaccccaccttgctagaaacccctacctggtg
ctccatgtgcgtaggaaccatttagtaagtgacaccctacgtgagctcaccatgtacact
gatgtggacctcaagaagccactcaaggtgatatttgatggcgaggaggctgtagatgca
ggtggagtgactaaagagttcttcctgctgctgttaaaagagctgatggatcctgtttat
gggatgttcactcattataaagactccaacctgctgtggttctcagacacttgttttgta
gagcagaactggttccacctgattggggtcatctgtggtctggccatctataactccact
gtggtggacctgcacttccctctcgctctctacaagaaacttctagatgttttgcccaaa
ctggaagactttaaggagctctcgccgacagaggccaggagtcttcaggagcttttggac
tatgaaggggaagatgtggaagaaatatttcttcttaacttttctatcactagggagaat
tatgggatggtagaagtcaaggagctggttcctggaggagaaagcatcgccgtggacaaa
aacaacaggaaggagtttgtggaggcctacctgcgctacgtgttcacggactctgtgtcc
gagcagtactctgccttctcctccggtttcctgaaggtgtgcgggggggagattctggcg
ctgttccagccctctgagctgatggccatggtggttggcaacaacaattataactgggag
gagatggagaagaacgctgtttacaaaggagagttctcagcgactcacccaacagtcaga
ttgttctgggaggttttccacgaattttccttggaaaagaagaagcagttcttactgttc
ctcaccggcagtgaccgtatccccatccatggaatggagagcttgcgtatcgtcatccag
tccaccacggccgaggagcattacctgccggtggcccacacctgctacaacctcctggac
atgccccgctaccagaccaaagagatcctgcgtcgccgtctgactcaggccgtggagcaa
tacgagggcttcagcctggtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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