KEGG   Nothobranchius furzeri (turquoise killifish): 107389385
Entry
107389385         CDS       T05163                                 
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    107389385 (hdac4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nfu03036]
    107389385 (hdac4)
Enzymes [BR:nfu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107389385 (hdac4)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107389385 (hdac4)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 107389385
NCBI-ProteinID: XP_015820997
UniProt: A0A8C6LGM8
Position
sgr14:1944138..2135831
AA seq 1098 aa
MLYQTSATKSMSSYTHQVDVSTAALPSQVPPTTTALLPMDLRVVDHPHPHHHQQPPFGLV
SQPHPTPTPSTACPASSESGSGPVIGHQETHLQQELVALKHKQQLQRQLLIAEFQRQHEQ
LSRQHEVQLQEHIKHQQDLLALKHQQELLEHHRKMEQQRHEQQLEKQQREQKLQQLKNKE
RGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLLSTPRYWYGKTQHSSLDQSSPPQT
ALSAYNHPVLGAYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPISTAK
KRPLDVADSACSSAPGSGPSSPNNSSSHIPSENGIPNSSSPGEVALLQRLAMRDGSVSQL
SLYTSPSLPNITLGLPATGPAGAVVSGHQDGESPLALPALQQGIPVTPAFLPTSHLPSYL
APSALDREGPGGGTAGHNALLQHMVLLEQSHGPVVGLGGLPMTSPTVSKLVRGHRPLGRT
QSAPLPQQPCGQTQALQQLVVQQQHQQFLEKHKLFQQQHIINKIMSKPGDQVSPPGSGAA
VPSRHHQSHPEETEEELREHQGLSSSSSTSSSSSVPETGSMRGLVIKQEPLDLQEQEERE
QRERQVEQDFLFNQQALLLEQQRIHQLRNYRASIEAAGLPVSIAVHRPLSRAQSSPASAS
FPIVVPEPPVKHQFTTGLVYDSLMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRSRC
ECIRGRKASQEELQTVHSEAHVLLYGTSPLRQKLDGSVNSVFVRLPCGGVGVDSDTIWNE
VHSSAAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKL
LQQRLNVSKILIVDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGSGAPDEVGSGA
GEGFSVNIAFTGGLEPPMGDAEYLAAFRTLVMPIANEFAPDMVLVSSGFDAVDGHAPPLG
GYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEACISALLGNELDPISYEV
LQQRPNANAVHSMEKVVEIHGKYWRSLQRSASTLGCSLSEALQRDTEEAETVSAMASLSV
ANKHKRSEEEPMEEEALI
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgctctatcaaacatcagcaactaaaagtatgtcctcctacactcaccaagtggatgtg
agcacggcagcccttccctcgcaggttccccccaccaccacagccctcctccccatggac
ctgcgcgttgtggaccatcctcacccccaccaccaccagcagccgccctttggcctggtg
tcccagccccaccccacaccgaccccctccacagcttgtcctgcatcttccgagtcgggc
agtggaccggtcatcggccaccaggagacacatctgcagcaggagctggtggccctcaaa
cacaagcagcagctccagaggcagcttctgattgcggagtttcagaggcagcatgagcag
ctgtcgcgacagcatgaagtccagctgcaggagcacattaagcatcaacaggatctactg
gctcttaagcaccaacaagagctgctggagcatcacaggaagatggagcaacagcgtcat
gagcaacagctggagaagcagcagcgggagcagaaacttcagcagctgaagaacaaggag
aggggacaagagagcgccgtggccagcactgaggtaaagatgcgactgcaggagtttgtc
ctgaacaagaagaaagccctggctcagcgaaacctaaaccactgcctgcttagcacgccc
cgctactggtatgggaaaacgcagcacagctctttagaccagagctcaccccctcagacg
gcactatcagcatacaaccatccagttctgggtgcatatgactctaaagacgacttccca
ctacgaaaaactgcgtccgaacccaacctgaagcttcgctcccggctaaaacagaaggtg
acggagcgccggagcagcccacttctccgcaggaaggacggacccatcagcactgccaag
aagcgacccctggatgtagctgactctgcatgcagcagtgcaccaggctcaggtcccagt
tctcccaacaacagctccagccacatccccagtgagaatgggatccccaactccagcagc
ccaggagaggtcgccctccttcagaggttggctatgcgggacggttcggttagccagctg
tcactctacacgtctccttctctgcccaacatcaccctgggactgccagccactggtcct
gccggcgctgtggtatcgggacaccaagatggcgagagtcctctggcgctgcctgcgtta
cagcagggcattccagtgacccctgcttttcttcctacttcccacctgccttcatacttg
gcaccttcagcactggacagggaggggcctggagggggcacagctggtcacaacgccctc
cttcagcacatggtactactggagcagagccacggtccagtggtgggtctgggtggctta
cccatgacgtcaccaactgtctccaagctggttcgaggccaccgccccctgggaagaacc
cagtcggctcctctgccccagcagccgtgtgggcagacccaggccctgcagcagctggtg
gtccagcagcaacaccagcagttcctggaaaagcacaaactattccagcagcagcacatc
atcaacaagatcatgtccaagcccggcgatcaggtgtcgcctccaggatctggtgcagcg
gtaccaagtcggcatcatcagagtcacccagaggagacggaagaggagctcagggagcac
caagggctgtcctcatcctcctccacatcctcctcttcatcagtgccagagacagggtcc
atgagggggctggtcatcaagcaggaacctcttgacctccaagagcaagaggaaagggaa
cagagggagaggcaggtggagcaggacttcctgttcaatcagcaggcgttgctcttggag
cagcagcgcatccatcagttgaggaactacagagcctccatagaagctgcagggttaccc
gtcagcatcgctgtccaccgtcctctgtcccgggctcagtcgtctccagcctccgcttcc
ttccccatcgtagtcccggagccgcctgtgaagcatcagtttactacaggtctggtgtat
gactctttgatgcagaagcaccagtgcatctgcggcaacgccaccatccatccagagcac
gccggtcgtattcagagcatctggtcccggctgcaggaaacgggcctccggtctcggtgt
gagtgtatccgtggccggaaggcctcgcaggaggagttacagacggttcactcggaggct
cacgtcctactgtacggcaccagcccactgaggcagaagctggacggttcggtgaactcc
gtgtttgtgaggttgccgtgcggcggcgtcggggtggacagcgacacgatttggaacgag
gtccattcgtccgctgctgctcgtctggctgtcggctctgtggtggagctcgttttcaaa
gtagcatcgggagagctgaagaatggcttcgctgtagttcgcccacctggacaccacgct
gaggagagcacacccatgggcttctgttatttcaattctgtcgccgtagcagccaagctc
ctgcagcagaggctgaacgtcagtaagatcctcatcgtggactgggatgtccatcatggt
aatggcacccagcaggccttctacgccgacccgagtgtcctctacttgtccctgcatcgc
tacgacgacgggaacttcttcccaggcagcggggcacctgacgaggtgggcagtggtgca
ggtgagggcttcagcgtgaacatagcgttcaccggaggcctggaaccgcccatgggggac
gcggagtatctcgctgcattcaggacgttggtcatgcccatcgccaatgagtttgcccca
gatatggttctggtgtcgtctggctttgacgcggtggacggacacgccccgcccctggga
ggatacaaactgacagccaaatgctttggctacctgaccaggcagctgatggcgctggcg
ggcggtcgcttggtgctcgccctggaggggggtcacgacctcacggccatatgtgacgcc
tctgaagcctgcatctctgctctgctcggcaatgagttggaccctatttcatatgaggtg
cttcaacagagaccaaacgccaacgctgttcactcgatggagaaagtcgtcgaaattcac
ggtaaatactggcgttcacttcaacgctccgcctccacacttggctgttcgttgagcgaa
gcgctgcagcgggacaccgaggaggccgagaccgtctccgctatggcttcgctgtccgtc
gctaacaaacacaaaagaagtgaagaggaaccaatggaagaagaggctttgatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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