KEGG   Nothobranchius furzeri (turquoise killifish): 107393781
Entry
107393781         CDS       T05163                                 
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013  Nucleocytoplasmic transport
nfu03015  mRNA surveillance pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107393781 (eif4a3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    107393781 (eif4a3)
   03015 mRNA surveillance pathway
    107393781 (eif4a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107393781 (eif4a3)
   03041 Spliceosome [BR:nfu03041]
    107393781 (eif4a3)
   03009 Ribosome biogenesis [BR:nfu03009]
    107393781 (eif4a3)
   03012 Translation factors [BR:nfu03012]
    107393781 (eif4a3)
Enzymes [BR:nfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107393781 (eif4a3)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107393781 (eif4a3)
   mRNA cycle factors
    Stress granule specific factors
     107393781 (eif4a3)
Spliceosome [BR:nfu03041]
 Complex C
  Other components
   EJC/TREX
    107393781 (eif4a3)
Ribosome biogenesis [BR:nfu03009]
 Eukaryotic type
  90S particles
   Helicases
    107393781 (eif4a3)
Translation factors [BR:nfu03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    107393781 (eif4a3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 TniB Flavi_DEAD
Other DBs
NCBI-GeneID: 107393781
NCBI-ProteinID: XP_015827875
UniProt: A0A1A8A206
Position
sgr02:24771268..24784002
AA seq 406 aa
MASAGTQGRKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcttctgccgggacacagggcaggaagaggctcctgaaagaggaggacatgaccaag
gtggagttcgagaccagtgaggaggtggacgtcactcctacgttcgacacgatggggctc
cgggaggatctgcttcgcgggatttacgcttacggctttgagaagccgtcagccatccag
cagagagccatcaaacagatcatcaaagggcgagacgtcatcgctcaatctcagtctgga
actggaaagacggccaccttctgtatctctgtgctgcagtgtctagacatccaggtgagg
gagacccaggctctgattcttgctccaactcgagagttggctgggcagattcagaaggtg
ctgctggctctgggagactacatgaacgtccagtgtcacgcctgcatcggagggaccaat
gtgggagaggacatccgtaagctggactatggtcagcacgtggtggccggcactcctggc
cgtgtgtttgatatgattcggcgccggagtctgagaacccgggccatcaagatgctggtt
ctggatgaagcagatgagatgctgaacaaaggcttcaaggagcagatttacgacgtgtac
cggtacctgcccccggccacacaggtggtcctgatcagcgccacgctgccgcacgagatt
ctggagatgaccaacaagttcatgactgacccgatccgcattctggtcaaacgtgatgag
ctgaccctggagggcatcaagcagttctttgttgccgtggagagggaggaatggaagttt
gatactctgtgtgacctctacgacacgctgaccatcactcaggccgtcatcttctgtaac
accaagagaaaggtggactggctgacagaaaagatgagggaggccaacttcactgtgtcc
tccatgcacggagacatgccgcagaaagaacgagagtccatcatgaaggagttcagatct
ggagcaagtcgtgtcctcatctccaccgatgtctgggctcgaggtctggatgtcccacag
gtgtccctcatcatcaactatgatctgcccaacaacagagaactctacatccacaggatt
ggtcggtcgggtcgttatggcagaaagggtgtggccatcaactttgtgaagaacgatgac
atcaggatccttcgagacatcgagcagtactactccacccagattgatgagatgccgatg
aatgttgctgacctgatctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (341)   
   KEGG ORTHOLOGY (1)   
   RefGene (337)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (366)   

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