KEGG   Nothobranchius furzeri (turquoise killifish): 107395257
Entry
107395257         CDS       T05163                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013  Nucleocytoplasmic transport
nfu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107395257 (pnn)
   03015 mRNA surveillance pathway
    107395257 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107395257 (pnn)
   03041 Spliceosome [BR:nfu03041]
    107395257 (pnn)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107395257 (pnn)
Spliceosome [BR:nfu03041]
 Complex C
  Other components
   EJC/TREX
    107395257 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107395257
NCBI-ProteinID: XP_015830078
UniProt: A0A1A8TZH9
Position
Unknown
AA seq 676 aa
MAVAVRSLQDQLEKAKESLKSVDDNIRKLTGRDPNESRPGQIRRLSGPMAAGLGGGRGRG
LNLLRRSLSDMGSGGPPAKQRDIQGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSS
VVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNESSDKLKRRSEIEQ
KLEVQAEAEKKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLLKYIRT
KTKPHLFFLPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLNKMESRPRRQPNREQDA
NIATRTERPAEGKPAGQVDKRTGKRGEKGMDEDEDEEEEVEVEKDESKKTTEGEGTSNVN
EEEKEVLKKIEEDEEEEMEVSQEGKEEKKGEQKGEEGDEEKEEKETSPQSEEMEVEEKAE
KDVVEEKEVETVSQQRLAELQDEKTPGVQISETAESSQEAPDRSDGLAAGEPAVQSRGTE
AASPAQEPQVASTPPVQNPTTPGSNDQEPTNESQTVERESGEEAPQKLPDSQEASGALPV
VTPVKEGEKDGRGRKKEKEQKKRRSQSNSSSSSSGSSSSGSSSSSSSGSSHSSSSSSSSS
SSSSSRSRDGGKRKRRPSDRGRNAKKGDERSHHKKGGSSGGGRDVKERRKRSDEGKGRSS
RSDREHKDGDRKAKRH
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcggtggcggtgcggagcttacaagatcagctcgaaaaagccaaagaaagcttgaaa
agcgtggatgataatattcgcaaactgactggacgagacccaaatgagtcaagaccgggt
cagatccgccggctcagcggccccatggcagcaggcctgggaggaggtagaggcagagga
ctcaacctgctcaggcgtagtctctcagacatggggagcggaggccctcctgccaagcag
agggacattcaaggagccctgttgaggctggcaggagatcagagggccaggagagacgcg
cgtcacgacagcgacgccgaggatgatgacgatgtcaaaaaaccggcgttgcagtcgtca
gttgtagctacctccaaggagcgaacacgccgagatctcatccaggatcagactatggat
gaaaagggcaaacagaggaatcggcgtatgtttggcctgctgatgggaacgctgcagaaa
ttcaagcaggaatcaaacgagtcttcagataagctgaagagacgctccgagatcgagcag
aagctcgaggttcaagctgaggctgagaaaaagaaggtggagaacgaaaagagagaactg
tttgaagagaggagagccaagcagactgagctgagactgctggaacagaaagtggaattg
gctcagctgcaagaggagtggaccagccacaacaatcgcctgctgaaatacatccgcaca
aagaccaagcctcacctcttcttcctgcctgggaaaatgtgctcggccactcagaaactc
ctcgaggaatccaccaagaaactaaatgctgtttttgaggagaggcgtgaggcatttgcc
gaacacctcaacaagatggagtcacgcccccggcgacagccgaaccgcgagcaggacgcc
aacattgctacaaggacggagcgcccagcggagggtaagccagcaggtcaggtagacaag
cggacaggtaaaaggggtgaaaagggaatggacgaagatgaggacgaagaggaagaggta
gaggtagagaaggatgagagtaaaaagacaacagagggagaaggaactagcaatgtaaat
gaagaagagaaagaagttttaaagaaaatagaagaagatgaggaggaagagatggaggta
agtcaggaggggaaagaggagaaaaagggggagcaaaagggggaggaaggggatgaggag
aaggaagaaaaggagacaagtccacagtcagaagagatggaggtggaggaaaaggcagag
aaagatgtggttgaggagaaagaggtagaaacagtcagtcagcagcggctcgcggagctc
caagatgaaaagactccaggtgtgcagatatctgaaacagctgagagcagccaggaagca
ccagaccgcagcgatgggcttgctgcaggagaaccagccgttcagtcccggggcacagag
gcggcttctccggcccaagaaccacaggtggcctccactcctcctgtccagaatcccacc
actcctgggtccaacgaccaggagcccaccaacgagagccagacagtcgaaagagagtcg
ggggaggaagccccacaaaagctgccagattctcaggaggcctctggagcccttcctgtt
gtcactcctgtgaaggagggtgagaaggacggcagagggaggaagaaggaaaaggagcag
aagaaacgccgcagtcaaagcaacagctcctcgtcctcttctggatcctcctccagtgga
agttcctcttcttcttcctcaggatccagccactcctcatcgtcctcgtcctcttcttcc
tcgtcatcaagcagccgcagccgagacggcggcaagcggaagcgtcggccatcggataga
ggtagaaatgcaaagaaaggagatgagagaagtcaccataaaaaaggcgggagtagtgga
ggtgggagggacgtgaaggagaggaggaagaggagcgatgaggggaagggtaggtcttcc
cggagtgatagggagcataaagatggagacaggaaggccaagagacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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