KEGG   Nothobranchius furzeri (turquoise killifish): 107395465
Entry
107395465         CDS       T05163                                 
Name
(RefSeq) lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107395465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nfu03000]
    107395465
   04121 Ubiquitin system [BR:nfu04121]
    107395465
   03036 Chromosome and associated proteins [BR:nfu03036]
    107395465
Enzymes [BR:nfu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107395465
Transcription factors [BR:nfu03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107395465
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     107395465
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107395465
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107395465
SSDB
Motif
Pfam: PHD_4 F-box-like JHD F-box JmjC Cupin_8 PHD
Other DBs
NCBI-GeneID: 107395465
NCBI-ProteinID: XP_015830349
UniProt: A0A9D2YAL1
Position
sgr02:complement(51491026..51534597)
AA seq 1342 aa
MAESAETGAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLVSDSYNADFVHTM
DGKDFTYEYVQKEALRIPLIFKEKGELGIRMPDPEFTVGEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVMDQVDWVDNMWPPDL
KKSQTESTNIISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
TLNLALYEDWVLSGKQSDVFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPADTLVFGG
NILHSFNIPMQFTIHEIENRTKVHSKFRFPFYYEMCWYVLERYLHCLTKRSYFNQEIQKE
SLDYEARVKTECPSPDSRSQDTNEDSWGAQIRNEQGEKAERVSEDDSPENVKGPLLKAVL
CVDSEDSCNPNSVSLDFPKTPLDSPASELQGKWTHLTQYELMGLRTLVEKLESLPENKKC
VPVGIENPQGLLEDIKAVLKDHAEDDPQLAITGVPVVFWSKKTIEVKTFQCFSLKMFNFC
QLIKQKVNFIPGPILYILFCSPQPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSI
CNEIVHPNCLKVKDSNGLVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKE
PRLNRDSKVEPDMPTVAPTTVTALTTTSAVKRKTEREVVPKRNDEEPPKKRPPLLTLEGL
PRARLEDNPLRKKRKLFETNDEPILVKKKKKPPKPDDPFSLKLLRHIKTENDHGDEEEEQ
GDREDNGLSLGRMHLKGEHDYDDEVQKEDTEEEETVTKGRDKARVLLSPLLRVSSARESD
HSSSNPPRAGPSSESGDVQERSSAQLKARHQRRRLPNKGGGKEFSQDMKLEDSMSNQRHP
PESAENNSAAHHRRPSKSEDSVGNQNCIPLKAEDSANNQSCRVLKLEEGAINHVRQPLKT
EDCLTSQNHSPVKAEPESEVDDQKPRWLLNNGGSDLGDWLRHRGREVNGTPQAYSPLGWN
RNTPIKPMCSRPLPRRSPPKYIQMERHVIRPPPISPPPDRLPLSDGEAHVVWRETWMKVF
SHLTHKDLCVCMRVCRTWNRWCCDKRLWTHISLKRCKSITPLMLSGIIRRQPVALDLSWT
NISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDL
LSPPTDNRPGQIDNRSKLRNVEDLRLAGLDVTDTSLRLIIHYMPLLSKLDLSYCNHVTDQ
SVNILTAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCEQF
IAEMSVSVQFELLEDKLLQRIA
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggctgagtccgcggaaacgggtgctgagtccggacggaggctgcgctccatctgccgg
aggatgtacgatgaaaatgaagatctgtctgatgtggaagaaatagcaaacatccgaggt
ttcagtgtggaggaaaagcttgttagtgacagctacaatgccgattttgtccacacaatg
gatggcaaagatttcacttatgaatacgtgcagaaggaggccctcaggatcccactcatt
tttaaagaaaagggggaattagggatcaggatgcctgatccagagtttacagttggtgaa
ataaaaggattagttggcagtcgtcgctccgtggacgtcatggacgtgagcactcagaaa
ggctctgagatgagcatggctcagtttgtccgctattacgagacgccagaggaagagcga
gacaaactcttcaatgtcatcagcctggagttcagccacactaagctggagaacctcatc
aagcggccaacagtgatggatcaagtcgactgggtggacaacatgtggcctcctgacctg
aaaaaaagtcaaacagaatccaccaacatcatttcagagatgaagtatcctaaagtgcag
aggtattgtttgatgagcgtgaaaggctgctacacagatttccacatcgactttggagga
acttcagtttggtaccatgtgttcaaaggacagaaagtgttctggctggttcctccgacc
acacttaacctcgccctgtatgaagactgggtcctttcaggcaaacagagtgacgtcttc
ctgggagaccgagctgatgggtgccagagagtggagctcaaacaaggatacaccttcttc
atcccatctggttggattcatgccgtctacactcctgcagacacactggtgtttggaggc
aacattctccacagcttcaacattcctatgcagtttacaatccacgagatagagaacagg
actaaggttcattccaaatttcggtttccgttttactacgagatgtgctggtacgtcctg
gagcgatacttgcactgcctgacgaaacgctcctacttcaatcaggagatccagaaagag
tctttagattatgaagcaagggtgaagacggagtgtccctctcctgactccagaagccag
gacacaaacgaggattcatggggagctcagattaggaatgagcagggagaaaaggctgag
cgagtgtccgaggatgactcgcctgaaaacgtaaagggcccgctcctcaaagctgttttg
tgtgtggactctgaggacagctgtaatcccaactcagtgtctttagatttccccaaaacc
cccctggactctccagcctctgaacttcagggaaaatggactcacttgactcagtatgag
ctgatgggactcaggacgctggtggagaagctggagtcactccctgaaaataagaaatgt
gttccagtgggaatagagaaccctcaaggactcctggaggacataaaggctgtcctgaag
gaccatgctgaagacgacccacagttagcgatcactggagttcctgtggtgttctggtcc
aagaaaaccatcgaggtaaaaacatttcagtgcttttctcttaagatgtttaatttttgt
cagctcataaagcagaaagttaacttcattcctggcccaattttgtacattttgttttgt
tctcctcagcctgttttgccccacaccgctgtgtgtctcgtctgtggggaggctggaaag
gaggacacggtggaggatgaggaggagaagtttaacctgatgctcatggagtgctccatc
tgtaatgagattgttcatcctaactgtctcaaggttaaagattcaaatggattagtcaat
gatgagctgccaaactgttgggagtgcccaaaatgtaaccacgctgggaaaactgggaaa
caaaaaagggggccaggatttaagtacgcctccaacctccccggctccctccttaaagaa
ccgcggctgaaccgggactcgaaagtggagccggacatgcccacggtggctcccacaacc
gtcacggctctgacgaccacatccgctgtgaaaagaaagacagagcgggaagtcgtccct
aagaggaacgatgaggaacctcctaagaaacgcccacctctgctgaccctggagggtcta
ccacgagcaagactcgaggacaatccgctgcggaagaagaggaaactgtttgagaccaac
gatgaacccatcctggtgaaaaagaagaaaaaacctcctaaaccagacgatccgttcagt
ttgaaactgttgcggcacatcaagacagagaacgatcacggcgatgaagaggaggagcag
ggggatcgggaagacaatggtttatctttgggcaggatgcatttaaagggggaacacgat
tatgatgatgaagtgcagaaagaggacacagaggaagaagagactgtgacaaaagggaga
gacaaagctagagttctcttgagtcctctgctaagggtgtcttcagccagagaaagcgat
cattcatcctccaaccctcccagagcaggaccaagcagcgagtcaggagacgtccaggag
aggagctctgcgcagcttaaagctcgacatcagcgccggcgccttcccaacaaaggaggg
ggcaaagaattcagccaggacatgaagttagaggactcgatgagcaatcagaggcatcct
ccagagagtgcagagaacaactccgccgctcatcatcgcaggccatcgaaaagcgaagac
tctgtgggcaatcagaactgtataccactaaaagcagaagactcagctaataatcagagc
tgtagggtcctgaaactggaggaaggtgcgataaaccacgtcagacagcctctgaaaacc
gaagactgcctgaccagccagaatcacagtccggtcaaagccgagcctgagagcgaagtg
gacgaccagaagccgaggtggcttctgaacaacggcggcagtgatctgggtgactggctg
agacacagagggcgggaggtgaatgggacgccgcaggcatactctccactcggctggaac
agaaacacacccatcaaaccgatgtgctcccgccctctccctcgcagatcaccaccaaaa
tacatccaaatggagcgccatgtgatccggcctcctcccattagccccccgcccgacaga
ctaccgctgagcgacggtgaagcacacgtggtgtggcgagagacatggatgaaagtgttc
agccacctcacccacaaagacctgtgtgtgtgcatgcgcgtgtgcaggacatggaaccga
tggtgctgtgacaaaaggctttggacgcacatcagtttgaaacggtgcaagtccatcact
cctctaatgctgagcggcatcatccggaggcaaccggttgctctggacctcagctggacc
aacatttctaagaaacaactcagctggctcatcaacagacttcctggtctgcgtgtgttg
cttctgtccgggtgctcttgggtggctgtctccgcgctttgcacctccagctgtcctctc
ctacgaacgctggacgttcagtgggtcgaaggactaaaagacgctcagatgagggacttg
ctgtcgccgcctacagataacagaccaggtcagatcgacaacagaagcaagctgcgtaac
gtggaggacctgcgtctggcggggttggacgtcacggacacgtctctgcgcctcatcatt
cattacatgcctctgttgtctaagctggacctgagttactgtaaccacgtcaccgaccag
tccgtcaacatcctgaccgcagcggggacgaccaccagagactcactgactgatatcaac
ctgtcagtctgtaacagggtcacagaccagtcgctgacctatttcaaacgctgcgggagc
atctgtcacatcgacctgcgttactgcaaacaggtgaccaaggagggatgcgagcagttc
atcgcagagatgtcggtcagcgttcagttcgagctcttagaagacaaactgctgcaaaga
atcgcttag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (71)   

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