KEGG   Candidatus Nitrososphaera gargensis: Ngar_c12610
Entry
Ngar_c12610       CDS       T02305                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
nga  Candidatus Nitrososphaera gargensis
Pathway
nga03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ngar_c12610 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nga03400]
    Ngar_c12610 (uvrC)
DNA repair and recombination proteins [BR:nga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ngar_c12610 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR GIY_YIG_2
Other DBs
NCBI-ProteinID: AFU58201
UniProt: K0IA66
Position
complement(981069..982697)
AA seq 542 aa
MVAATTILKEKRMPDEPGVYLMKDSDGKIIYIGKAKNLRKRVTSYFTKHDPDVGWKTSRL
VNKIADIEFIVTDNEIEAFLLESNLIKRYRPVFNIELKDQQRYTYLKITDEPFPRLLVAR
RNRNGEFLGPKGKVYGPFVRGSSKFLTVGLLRKLFKIRICNRLPKTPCLQYFIKNCEAPC
IANVTRGHYMMNVMALQDILEGKSSIDKFANNMEDEMKRASDLGDYERAKEIRDTLYRLN
NLRVKQKMEKAVNRNPDEEYISIMRDNKKGIAHVMALRRTRGVISDRKKFEFDLVGDNSL
SSFLVQYYSSVPVIPRFLYVNEDLDDRQVLERSLEKIAGHRVSIFNIRHVLAKEKRQLMD
LISRNLSMYIERGYDPAVVELKNAIRLLSMPEVIDCFDVSNLGTSIAVGSCVRFANNKPA
KSSYKKFRIRTVAGQNDFAMIGELVRRRYHSAGDDEKLPDLIVIDGGHGQLGAAVASLRS
LGIHDVPCIGLAKENEEIYMPGLQEPIVLPKSNAGLKMLQHARDEAHRFGLAYNVNLRKL
RH
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggtggccgcaacaacaatcctgaaagaaaagcgcatgcccgacgagccgggcgtgtac
ctgatgaaggacagcgatggcaagataatctacatcggcaaggcaaagaacctgagaaag
cgtgtcacttcgtacttcacaaagcacgacccggacgtcggatggaagaccagcaggctt
gtgaacaagatagcagacattgaatttatcgtcacagacaacgagatagaggcgttcttg
ctagagtcgaacctgatcaagcgctaccgccccgtattcaacatcgagctcaaggaccag
cagcgctatacctacctaaagataaccgacgaaccattcccgcgcctgctggtcgcgcgg
cgcaatagaaacggcgagttcctcggtccaaagggcaaggtctacggcccgtttgtgcgc
gggagctccaagttcctgaccgtcgggcttttgcggaaattattcaagataaggatatgc
aacaggctgcccaagacgccctgcctccagtactttatcaagaattgcgaagcgccatgc
atagccaatgtgacgcgcgggcactacatgatgaatgtcatggcattgcaagatatcttg
gagggcaagagcagcatcgacaagtttgcaaacaatatggaggatgaaatgaagcgcgcg
tcagacctaggggactatgaaagagccaaggagatccgcgatacgctgtacaggttgaac
aacctccgcgtcaagcaaaagatggaaaaggctgtgaataggaaccccgacgaagaatac
atcagcataatgagggataacaagaaggggatagcccatgtgatggcgctccgacggacc
cgcggcgtcatcagcgataggaaaaagttcgagttcgatctcgtcggggataactcgctt
tcatcattccttgtccagtactattcctctgtgccggtgattccaaggttcttatacgtc
aacgaagacctagatgacaggcaggtgctagagaggtcgcttgaaaagattgcagggcac
agggtgagcatctttaacatcaggcatgtcttggcaaaggaaaagcgccagctcatggat
ctaatctcccggaacctatcgatgtacatcgagagaggctatgacccggctgtggtggag
ctgaaaaacgccatcaggcttctttccatgccagaggtcattgactgctttgacgtttca
aatcttgggacttcgattgcggtcgggtcatgcgtcaggtttgccaacaacaagccggcc
aagtcatcatacaagaaattcaggatcaggacggttgcaggccagaacgactttgccatg
ataggcgagcttgtgcggaggagataccactctgctggtgatgatgaaaagctgccagac
ctgatagtcatagacggcggccacggccagctcggcgcagctgtcgcttcgcttcgaagc
cttgggatacatgatgtcccatgtataggtcttgcaaaggagaatgaagagatctatatg
cccggcttgcaggagcctatcgtgctgccaaagagcaacgcaggtctcaagatgctccaa
cacgcaagagacgaggcccacaggttcggtcttgcatacaacgtaaatctacgcaagttg
cggcactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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