KEGG   Novosphingobium ginsenosidimutans: FRF71_00860
Entry
FRF71_00860       CDS       T06189                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ngf  Novosphingobium ginsenosidimutans
Pathway
ngf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FRF71_00860 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngf03400]
    FRF71_00860 (uvrA)
DNA repair and recombination proteins [BR:ngf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FRF71_00860 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FRF71_00860 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 AAA_25 DnaJ_CXXCXGXG AAA_21 AAA_23 BCA_ABC_TP_C BsuBI_PstI_RE_N
Other DBs
NCBI-ProteinID: QEA14791
UniProt: A0A5B8RZI0
Position
complement(180879..183770)
AA seq 963 aa
MSLSKIVVRGAREHNLKGFDVELPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLELMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARTGVP
YSPATGEPISAQTVSQMVDRVMALPEGTRAYLLAPVVRGRKGEYRKELAEWQKAGFTRVR
IDGEFYGIEDAPALDKKYKHDIEVVVDRIAVREGIETRLADSFEQALKLADGLAYIDLAD
GNVPGHEGEKGGAMKGAGLPDNRIVFSEKFACPVSGFTIESLEPRLFSFNAPMGACPACD
GLGEKLLFDPQLVVPNEALSLKQGAVVPWAKSNPPSPYYMQVLASLAAEFGFSLDTPWQE
LPVEVRIVILHGTAGRPVNLTFIDGKKSYTVKKPFEGVIGNLNRRMLQTESAWMREELGK
FQTAQPCEVCEGKRLKPEALSVKVGGADISSITRLSVADAVAWFSGLDSQLTSQQSQIAR
AILKEINERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSI
GLHQRDNDMLLATLKRLRDLGNTVIVVEHDEDAIRAADHVVDLGPGAGVHGGEIVAQGTL
KDILKAKDSLTGQYLSGARKIEVPKARRKGNGHKLTVHNARANNLRGVTAAIPLGTFTCV
TGVSGSGKSSLTLDTLYAAAARTLNGARVIAGPHDKVTGLELCDKVIEIDQSPIGRTPRS
NPATYTGAFTQIRDWFAGLPESGARGYKAGRFSFNVKGGRCEKCQGDGLIKIEMHFLPDV
YVTCEECGGKRYNRETLEVKFKGHSIADVLDMTIEDAEEFFKAVPPIRDKMHMLNEVGLG
YVKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTTGLHFEDVRKLLEVLHRLV
DQGNSVVVIEHNLDVIKTADWIIDLGPEGGVRGGEIIAEGTPEEVVKAKRSYTAKYLAPL
LDR
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgtcgctcagtaaaatcgtcgtgcgcggagcgcgcgagcacaatctcaaaggcttcgat
gtcgagctgccgcgcgacagcctgatcgtgatcaccggcctctccggctccggcaagtcg
agcctggcgttcgacacgatctatgccgagggtcagcggcgttatgtcgagagtctctcg
gcctatgcgcgccagttcctcgagttgatgcagaagcccgatgtcgagcatatcgacggc
ctcagcccggcgatctcgatcgagcagaagaccaccagccgcaacccgcgctcgaccgtg
gcgacggtgaccgagatctatgactacatgcgcctgctctgggcccgcaccggcgtgccc
tatagccccgccacgggtgagccgatcagcgcgcagacggtcagccagatggttgaccgg
gtcatggccctgcccgaggggacgcgtgcctatctgcttgccccggtggtgcgcggccgc
aagggcgaataccgcaaggagctggccgaatggcagaaggccggcttcacccgcgtgcgg
atcgacggcgaattctacgggatcgaagacgcccccgcgctcgacaagaagtacaagcat
gacatcgaggtcgtggtcgatcgcatcgcggtgcgcgaagggatcgagacccgcctggcg
gacagcttcgaacaggcgctgaagctcgccgatggcctcgcctatatcgacctcgccgac
ggcaatgttcccgggcatgagggggagaagggcggcgcgatgaagggcgccggcctgccc
gacaaccgcatcgtcttctccgaaaagttcgcctgcccggtctccggcttcaccatcgaa
agcctggaacccaggctgttcagcttcaacgcgccgatgggcgcctgcccggcctgcgat
ggcctgggcgaaaagctgctgttcgatccgcagctggtcgtcccgaatgaggcgctctcc
ctcaagcagggtgcggtcgtgccctgggcgaagagcaacccgccgtcgccctattacatg
caggtgctggccagcctggcggccgagttcggcttcagcctcgatacgccatggcaggag
ctgccggtcgaggtgcggatcgtcatcctccacggcaccgccggccggccggtcaacctc
accttcatcgacgggaaaaagagctacacggtcaagaagccgttcgagggcgtgatcggc
aacctcaaccgccgcatgctgcagaccgaaagcgcctggatgcgcgaggagctgggcaag
ttccagaccgcgcagccgtgcgaggtttgcgagggcaagcggctcaagcccgaggcgctt
agcgtcaaggtgggcggggcggacatctcctcgatcacccggctctcggtcgccgatgcg
gtggcatggttcagcgggctcgacagccagctgaccagccagcagagccagatcgcccgc
gccatcctgaaagagatcaacgagcggctgggcttcctcaacaacgtcgggctcgattac
ctcaacctcgatcgcacttcgggcacgctctcgggcggggagagccagcgcatccgcctc
gccagccagatcggctcgggcctttcgggcgtgctctacgtgctggatgaaccgtcgatc
ggcctccaccagcgcgataacgacatgctgctcgccacgctcaagcggctgcgcgacctg
ggcaatacggtgatcgtggtggagcatgacgaggatgcgatccgcgccgccgatcacgtg
gttgatctgggccccggcgccggggtccacgggggcgagatcgtcgcccaggggacgcta
aaggatatcctcaaagccaaggacagcctgaccggccagtacctgtccggcgcccgcaag
atcgaggtgcccaaggcccgccgcaagggcaacggccacaagctgacggtccacaacgcc
cgcgccaacaacctgcgcggcgtcacggcggcgatcccgctcggcaccttcacctgcgtc
accggcgtttcgggcagcggcaagagcagcctcacgctcgacacgctctatgccgccgcc
gcccgcacgctcaacggcgcgcgggtcatcgccggcccgcatgacaaggtcaccggcctt
gaactgtgcgacaaggtgatcgagatcgatcaaagcccgatcggccgcaccccgcgcagc
aaccctgccacctataccggcgccttcacccagatccgggactggttcgccggcctgccg
gaatctggcgcgcgcggctacaaggccgggcggttcagcttcaacgtcaagggcgggcgg
tgcgagaagtgccagggcgacggcctgatcaagatcgagatgcacttcctccctgacgtt
tacgtcacctgcgaggaatgcggcggcaagcgctacaaccgcgaaacgctggaggtaaag
ttcaagggccactcgatcgccgacgtgctcgacatgacgatcgaggacgcggaagagttc
ttcaaggccgtccccccgatccgcgacaagatgcacatgctgaacgaggtggggctgggc
tacgtcaaggtcggccagcaggccacgaccctctcgggcggggaagcgcagcgcgtcaaa
ctcgccaaggaactcagccggcggtcaaccgggcagacgctctacatcctcgatgaaccg
accacgggactgcatttcgaggacgtccgcaaactgctggaggtgctgcaccggctagtg
gaccagggcaattcggtcgtggtgatcgaacacaatctcgatgtgatcaagacggcggac
tggatcatcgacctggggccagaaggcggcgtgcgcggtggggagatcattgccgaaggt
acacctgaagaggtcgtcaaggccaagcggtcctataccgccaagtacctcgcgccgttg
cttgaccggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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