KEGG   Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH42790
Entry
RG540_CH42790     CDS       T03244                                 
Name
(GenBank) DNA polymerase III, gamma and tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ngg  Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03030  DNA replication
ngg03430  Mismatch repair
ngg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ngg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RG540_CH42790
   03430 Mismatch repair
    RG540_CH42790
   03440 Homologous recombination
    RG540_CH42790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ngg03032]
    RG540_CH42790
   03400 DNA repair and recombination proteins [BR:ngg03400]
    RG540_CH42790
Enzymes [BR:ngg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RG540_CH42790
DNA replication proteins [BR:ngg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RG540_CH42790
DNA repair and recombination proteins [BR:ngg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RG540_CH42790
SSDB
Motif
Pfam: DNA_pol3_gamma3 DUF3646 DNA_pol3_delta2 AAA AAA_22 AAA_16 AAA_30 AAA_14 AAA_5 AAA_19 AAA_24 RuvB_N AAA_18 AAA_assoc_2 TsaE SRP54 DUF815 SKI CbiA Secretin_N Rad17 AAA_2 nSTAND3 AAA_28 RNA_helicase AAA_33 AAA_7
Other DBs
NCBI-ProteinID: CDN50421
UniProt: A0A068SXA9
Position
complement(4409764..4411650)
AA seq 628 aa
MSDTGPTSSSTSAANAATGSGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQA
YMLTGVRGVGKTTTARILARALNYKTPDINKPTIDLRIPGEHCQAIMEGRHVDVIEMDAA
SHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFAT
TEIRKVPITVLSRCQRFDLRRISAADLVHLFTSILEKEGIPAEPEALAMVARAAEGSARD
GLSLLDQAIAHGGGTVVAETVRGMLGLADRARIVDLFEHIVRGDVTAALSEFTAQYEAGA
NPVVVLTDLADFTHLTTRFKYIPDAANDPSISEVERVRGREFADGVAVSTLSRIWQMLLK
GIPEAENSSRPAGAAEMVLIRLTHAAHLPSPEDAARRLADFSNGDGQRAPVPNGNGGGRP
VSPPQSPVNARGTEMASPRIPAGGPTAMLQAVPNTMPRDMPVGRTEEQPAEKPVPKVPVN
SISDIADLCSKNRDPRLKALLRNFVRLVKIEPGRLEINLSGDAPKTIAGDLKARLEEWTG
ITWWVTLSNEAGEPTLVESEKSVREAQFTDARADPDVAAILAQFPGARITDVRIRVTEED
ENEAEDLPAAATAESEEGDILPGDDIEL
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgagcgataccgggcccacatcttcaagcacttccgcagcgaatgccgccacaggcagc
ggataccgggtgctcgcccgcaaataccgtcccaaggatttttcggacctgatggtcggc
caggagccaatggtccgcacgctgaccaatgcgttcgagaccggccgcatcgcccaagcc
tatatgctgaccggggttcgcggggtcggcaagacgacgaccgcccgcattctcgcccgc
gcgctgaactacaagacgccagacatcaacaaaccgaccatcgacctcaggatccccggc
gaacattgccaggcgatcatggaaggccggcatgtcgacgtgatcgagatggacgccgcc
tcccataccggcatcgacgatataagagagatcatcgagcaggtgcgctaccgcccggtc
tcggcgcgctacaaagtctatatcatcgacgaagtgcacatgctctcgacacaggccttc
aacggcctgttgaagacgctcgaagagccgccggaacatgtgaagttcatcttcgcgacg
acggaaatccgcaaggttccgatcaccgtcctgtcgcgctgccagcggttcgacctgcgc
cgtatcagcgccgcggacctggttcacctgttcacctcaatattggaaaaggaaggcatt
ccggccgagccggaagcgctcgccatggtcgcgcgtgcggcagaagggtcggcacgcgac
gggctgtcgctgctcgaccaggcgatcgcgcacggcggcggaaccgtcgttgccgagacc
gtgcgcggcatgctggggctcgccgaccgcgcccgcatcgtcgaccttttcgaacatatc
gtgcgcggtgacgtgacggcggcgctttcggaattcacggcgcaatacgaggccggcgcc
aatccggtcgtggtgctgaccgatctcgccgatttcacccatctgaccacccgtttcaaa
tatatccccgatgccgccaacgatccttcgatcagcgaagtggagcgcgtgcgcggccgg
gaatttgcagacggcgtggcggtcagcaccctgtcgcgcatctggcagatgctcctgaag
ggcattccggaagcggaaaactcctcgcgcccggcgggtgctgcggaaatggtgctgatc
cggctgacgcatgcggcccatcttccctccccggaagatgccgcccgcaggcttgcggat
ttctccaatggcgatggccagcgggcgccggttccgaacggcaatggtggcgggcgtccc
gtttcgccgccgcagtcgccggtcaatgcgcgcggcacggagatggcgagcccgcgtatt
ccggctggcgggccgaccgccatgctgcaggccgtgccgaacaccatgccgcgggacatg
cccgtcggccgcaccgaagaacagccggccgaaaagccggtgccgaaggttccggtcaat
tcgatatcggatatcgccgacctctgctccaagaaccgcgatccgcggctgaaggcgctg
ctgcgcaatttcgtgcggctggtaaagatcgagccgggtcggctggagatcaacctttcc
ggtgacgcgccgaagaccattgccggcgacctgaaggcgcggctggaggaatggaccggg
attacctggtgggtgacgctcagcaacgaggccggagagccaacgctggtcgaatccgaa
aagagcgtgcgggaggcgcagttcaccgacgcgcgcgccgatccggacgtggcggcgatc
ctcgcccagttccccggcgcacggatcaccgacgtgcgcatccgcgtgacggaagaggat
gagaacgaggccgaggacctgccggcagcggcgaccgcggaatccgaagagggcgacatc
ctgcccggcgacgacatcgagctataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (40)   

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