KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103725681
Entry
103725681         CDS       T03372                                 
Symbol
Exosc6
Name
(RefSeq) exosome component 6
  KO
K12587  exosome complex component MTR3
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103725681 (Exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngi03019]
    103725681 (Exosc6)
Messenger RNA biogenesis [BR:ngi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103725681 (Exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103725681
NCBI-ProteinID: XP_008821198
Position
Un
AA seq 260 aa
MPGDHRRIRGPEDSQPPQLYVAEKDETPVARDPTRLRPVYARAGLLSQAKGSAYLEVGGT
KVLCAVSGPRQAEGGERGGGPAGAGGXFRRAPFSGRRRRAPPGGGEERELALALQEALEP
AVRLGRYPRALLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPE
PTWLLDPTRLEEEHASAGLTVALMPVLNQVAGLLGSGEGGQTESWADAVRLGLEGCQRLY
PVLQQCLVRAARRRGAAAQP
NT seq 783 nt   +upstreamnt  +downstreamnt
atgccgggagaccatcgccgcatccgcggacctgaggactctcagccgccacagctctac
gtagctgagaaagacgagacgcccgtcgcccgcgacccgacgcggctgcggccggtgtac
gcgcgcgccgggctgctgagccaggccaagggctcggcctacctagaggtgggaggtacc
aaggtgctgtgcgctgtgtctggcccgcgccaggccgagggcggcgagcgcggcggcggc
cccgccggagccggcggcnngttccgccgcgcgcccttttcgggtcgccggcgccgcgcg
cccccgggcggaggcgaagagcgcgagttggcgctggcgctgcaggaggcgctggagccc
gcggtgcgcctgggccgctacccgcgcgcgctgctcgaggtatccgcgctgctgctggag
gacggcggctcggcgctggccgcagcgctcacggccgccgcgcttgcgctggcggacgcg
ggagtggagatgtacgacttggtggtgggctgtggcctgagcctcgcgccggggcccgag
cccacctggctgctggatcccacgcggctggaggaggagcatgcttccgccggcctcacc
gtggcactcatgccggtgctcaatcaggtggccgggctgctgggtagcggggaaggcggt
cagactgagagctgggcggatgcggtgcgcctgggcctcgagggctgtcagcgcctctac
ccggtgctgcaacagtgtctggtgcgggctgcacgccggaggggcgccgccgcccagccc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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