KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103726810
Entry
103726810         CDS       T03372                                 
Symbol
Ldb3
Name
(RefSeq) LIM domain binding 3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103726810 (Ldb3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ngi04990]
    103726810 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:ngi04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   103726810 (Ldb3)
SSDB
Motif
Pfam: LIM DUF4749 PDZ PDZ_6 PDZ_2 DUF3854
Other DBs
NCBI-GeneID: 103726810
NCBI-ProteinID: XP_008822663
Position
Un
AA seq 679 aa
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIAISTAAPSIQSPLPVIPHQKVVANSPANADYQE
RFNPSVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSD
FSGSLPVKDLAVDSASPVYQAVIKNQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYM
QDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQLPAATSPNAASPSLATATAAHAAIA
SAAAPASSPADSPRPQASAHGPAAAASPASTAHTSYSEGPVAPAPKPRVVTTASIRPSVY
QPVPVSTYSPSPGPNYSPSPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPN
YNPSPSGTYSGGPSESTSRPPWATDDSFSQKFAPGKNTTSISKQTLPRGAPAYTSTGPQM
TPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADMC
FVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLF
HMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQP
FYSKKDKPLCKKHAHAVNV
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgtcttacagtgtaaccctgacgggccctgggccctggggcttccgactacagggaggc
aaggacttcaacatgcccctcactatctcccggatcacaccaggcagcaaggcggcccag
tcccagctcagccaaggagaccttgtggtggccatcgatggtgttaacacagacaccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagcctcaccttg
cagaagtccaagcgtcctattgccatttccacagcggcaccatcaatccagtccccactg
ccggtgatcccccaccagaaggtggtagccaattctccagccaacgccgactaccaggaa
cgcttcaaccccagtgtcctgaaggactcagccctgtccacccacaagcccattgaggtg
aaggggctgggaggcaaggccaccatcatccatgcccagtacaacacacccatcagcatg
tactcccaagacgccatcatggatgccatcgccgggcaggcccaggcccagggcagtgac
ttcagtgggagcctccctgtgaaagacctggctgtggacagtgcctctcccgtgtaccag
gctgtcatcaaaaaccaaagcaagccagaagatgaggctgatgagtgggcccgccggtcc
tccaacctgcagtctcgctcctttcgcatcctggcccagatgacagggacagaatatatg
caagaccctgatgaagaggctctgcgaaggtcaagcacccctattgagcatgctccagtg
tgcaccagccaggccaccaccccgctgctgcccgcttctgcccagctgcctgctgctacc
tctcccaatgcagcctcgccatccctggccacagccactgctgcccatgctgccatcgcc
tctgctgcagcccctgcctcaagccctgcggacagtccaaggcctcaggcctctgcccac
ggccctgcagcagccgcctctccagcatccactgcccataccagctacagtgagggtcca
gttgcccctgcacccaagccccgggttgtcaccactgccagcatccggccttctgtctac
cagccagtgcctgtgtctacctacagcccatccccagggcccaattacagtccaagtccc
tatactccctcacctgctcctgcctatactccctctcctgcacccacctacaccccctcc
cctgctcccacctactccccttcccctgcaccagcttatactccctcaccggccccaaac
tataacccttcaccctccgggacctacagcgggggcccctcagagtctaccagccgtcct
ccctgggcaactgatgacagcttctctcagaagtttgctcctggcaagaacaccacctcc
atcagcaagcaaaccctgccccgaggggccccagcctatacctcaacaggtcctcagatg
acccctcttgccaggggcactgtccaaagagctgagcgcttcccagctagtagccggact
ccactttgcggccactgcaacaatgtcatcaggggcccttttctggtagctatgggccgc
tcctggcacccagaagagttcaattgtgcctactgcaagacctccctagcagatatgtgc
ttcgtggaggagcagaacaatgtttactgcgagcggtgctatgagcagttctttgcccca
ctctgtgccaaatgcaacaccaaaatcatgggggaagtgatgcacgccctgcgacagaca
tggcacactacctgcttcgtctgtgcagcctgcaagaaaccttttggaaacagcctcttc
cacatggaagacggagagccatactgtgagaaagactacatcaatctgttcagcacaaag
tgtcacggatgtgatttcccagtggaggctggtgacaagtttatcgaagccctggggcac
acctggcatgacacctgcttcatttgtgcggtctgccatgtgaatctggaggggcagcca
ttttactccaaaaaagacaaaccactgtgcaagaagcatgcacatgccgtcaacgtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (75)   

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