KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103732135
Entry
103732135         CDS       T03372                                 
Symbol
Ercc3
Name
(RefSeq) ERCC excision repair 3, TFIIH core complex helicase subunit
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03022  Basal transcription factors
ngi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103732135 (Ercc3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103732135 (Ercc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngi03021]
    103732135 (Ercc3)
   03400 DNA repair and recombination proteins [BR:ngi03400]
    103732135 (Ercc3)
Enzymes [BR:ngi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103732135 (Ercc3)
Transcription machinery [BR:ngi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103732135 (Ercc3)
DNA repair and recombination proteins [BR:ngi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103732135 (Ercc3)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34
Other DBs
NCBI-GeneID: 103732135
NCBI-ProteinID: XP_008828881
Position
Un
AA seq 767 aa
MGKRDRADRDKKKSKKRHYEEEEDEDDAPGNESQEAVPSAAGKQVDESGTKVDEYGAKDY
RLQMPLKGDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAY
SLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTISYGKVKLVLKHNRYFVESSH
PDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAEGGVGPSTSQVTDPQAK
SDIPTDLFDFYEQMDKEEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDS
VNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSW
EAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKF
RACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSTKEEQQQLLQKVLAATD
LDAEEEVVAGEFGSRSSHVSKWGEAPGQSTQKPRKAKVIFGGTGSVP
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgggcaaaagagaccgagcggaccgtgacaagaagaagtccaagaagaggcactacgag
gaggaggaagatgaagacgacgcgcctgggaatgagtcccaggaggctgtgccctcggcc
gccgggaaacaggtggatgagtctggcaccaaagtggatgaatacggagccaaggactac
aggctgcagatgccgctgaagggcgaccacacttctaggcccctctgggtggctcctgat
ggccacattttcttggaagccttctctccagtttacaaatatgcccaagacttcttggtg
gctattgcagagccagtgtgccgacctacccatgtgcatgaatacaagctaactgcctat
tccctgtatgcagctgtcagcgttggtctgcaaactagtgacatcactgaatacctcagg
aagctcagcaagactggagtccctgatggaattattcagtttattaagttgtgtaccatc
agctatggaaaagtcaagctggtcctgaagcacaacaggtacttcgttgaaagctcccac
ccggatgtcatccagcatcttcttcaagacccagtgatccgggaatgccgcctgaggaat
gctgaaggagaggccactgagctcatcacagagactttcacaagcaaatctgctatttct
aagactgcagaaggaggtgttgggccttccacttcccaggtgacagatccacaggctaaa
tctgatattcctacagacctttttgacttttatgagcaaatggacaaggaggaggaggag
gaagaggaaacacagacagtatcttttgaagttaagcaggaaatgattgaggagctccag
aagcgctgcatccacctggagtacccactgttggcagaatatgactttcggaatgattct
gtcaaccctgacatcaacattgacctgaaacccaccgctgtcctaagaccctatcaggag
aaaagcctgcggaagatgtttgggaatgggcgagcccgttcaggagtcattgttcttcct
tgtggtgctgggaagtccctggttggtgtgactgctgcatgcactgtcagaaagcgctgt
ctggtgttgggcaactctgctgtgtctgtggagcagtggaaagcccagtttaagatgtgg
tcaaccattgatgacagccagatctgccgcttcacctcagatgccaaagacaagcccatc
ggctgctccattgctattagcacttactccatgctgggccacaccaccaaaagatcctgg
gaggccgagagagtcatggaatggctcaaaacccaggagtggggactcatgatccttgat
gaagtgcataccattccagccaagatgttccgacgggtgctgaccatcgtgcaggctcac
tgcaagttgggtttgactgcaacccttgtccgggaagatgacaaaattgtcgacttaaat
ttcctgattgggcctaagctctacgaagccaactggatggagttgcagaacaatgggtac
atcgccaaagtccagtgtgctgaggtttggtgtccgatgtctcctgagttctaccgggaa
tacgtggcaatcaaaacaaagaaaagaatcttgttgtacaccatgaaccccaataagttc
agggcttgccagtttctgatcaagtttcatgaaaggaggaatgacaaaattattgtcttt
gctgataatgtgtttgccttgaaggaatatgccattcgcctgaacaaaccctatatttat
ggacctacatcccagggagaaaggatgcagattctccagaacttcaagcacaaccccaaa
atcaacaccatcttcatatccaaggttggtgacacatcctttgatctgccagaagccaat
gtcctcattcagatttcttcccatggtggctccaggcggcaggaagcccagcgcttgggg
agggtgctccgagccaaaaaaggaatggttgcagaggagtacaatgccttcttttactcc
ctggtgtcccaggacacacaggaaatggcttattctaccaagcgacagagattcttggta
gatcagggttacagctttaaggtgatcacaaagctagccggcatggaagaggaagagctg
gcattctccacaaaagaggagcagcagcagctcctgcagaaggtcctggccgccactgac
ctggacgccgaggaggaggtggtggctggagaatttggctctagatccagccatgtaagt
aaatggggggaggctccagggcagtccacacagaagcccaggaaagctaaggtgatcttt
ggtggcaccgggtcagtcccctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system