KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103740312
Entry
103740312         CDS       T03372                                 
Symbol
Rb1cc1
Name
(RefSeq) RB1 inducible coiled-coil 1
  KO
K17589  RB1-inducible coiled-coil protein 1
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04140  Autophagy - animal
ngi04211  Longevity regulating pathway
ngi05010  Alzheimer disease
ngi05014  Amyotrophic lateral sclerosis
ngi05016  Huntington disease
ngi05017  Spinocerebellar ataxia
ngi05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103740312 (Rb1cc1)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    103740312 (Rb1cc1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    103740312 (Rb1cc1)
   05014 Amyotrophic lateral sclerosis
    103740312 (Rb1cc1)
   05016 Huntington disease
    103740312 (Rb1cc1)
   05017 Spinocerebellar ataxia
    103740312 (Rb1cc1)
   05022 Pathways of neurodegeneration - multiple diseases
    103740312 (Rb1cc1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ngi01009]
    103740312 (Rb1cc1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ngi04131]
    103740312 (Rb1cc1)
   03029 Mitochondrial biogenesis [BR:ngi03029]
    103740312 (Rb1cc1)
Protein phosphatases and associated proteins [BR:ngi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103740312 (Rb1cc1)
Membrane trafficking [BR:ngi04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    103740312 (Rb1cc1)
Mitochondrial biogenesis [BR:ngi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    103740312 (Rb1cc1)
SSDB
Motif
Pfam: ATG11 ATG17_like TBK1_ULD ubiquitin SpoIIID
Other DBs
NCBI-GeneID: 103740312
NCBI-ProteinID: XP_008839128
Position
Un
AA seq 1591 aa
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEQEVSEKAMMKRSTEL
VLSPDMPRTTNTSLLTSFHKSVEHIASDTTDGQSGEEISESCQSAVQQDETSVDAKDSEL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSASSPRIESTTG
ITTTTSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNTEQTIHQASLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
ACGKEDFGVHASLHVQLEKCRVVAQDTHFSIQAIKEDLYHFRTFVQKEQCDFSNSLKCTA
VEIKNIIEKVKCSLEITLKENHQKELQSLKTEYEGKLDALAKEREENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICMQNEKDQKLLEMENIMHTQNCEIKELKQSREVALED
LKKLHVENDERMELLRAELQCLEQSHLKELEDTLHVRHTQEFEKVVTDHKVSLEKLKKEN
QQRIDQILDSHASTLQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RTQQKETLKSLLEKETESLRTEINKLNQKIQDNNENYQVGLSELRTLMTIEKDQCISELI
SRHEEESNILKAELDSVTSFHHQALEIEKHLKEQIVELQSKLDSELSALERQKDEKITQQ
EEKYDAIIQNFEKDKEKLVMSHKQDREQLIQQLNYEKDEAIQTALKEFALERELVEKDLL
EKLKHLENQIAKSPALESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSEKLKSTMQQQERDRDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFIPSPPIVAAPELYGACAPELPGDTARSETVDEGRVDSAMDTSMM
SVQENIHLLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQV
GDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKE
YCQAKKAQNRFKVPLGTKFYRVKAVSWSKKV
NT seq 4776 nt   +upstreamnt  +downstreamnt
atgaagttatatgtgtttcttgtcaacactggaactactctgacatttgacactgaacta
acagtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctggtggtcaatggaggagagtgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatcttg
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtcactcatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactgtgttcattttgtgaaggtcttgtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaactcataccaaaagctgcttttcaagtttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcagtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttaaatgaacaggaagtctcagagaaagccatgatgaaaagatccactgaactg
gtgctttctcctgatatgcctagaacaacaaacacatctttattaacctcatttcacaag
tcagtggaacacatagcttcagataccacagatggtcaaagtggtgaagaaattagcgaa
tcttgtcaaagtgctgtccaacaagatgaaacttcagtggatgctaaagacagtgaactg
cctttttttaatgtttctttgttagactggataaatgttcaggatagacctaatgatgtg
gaatctttggtcagaaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatgttagaatgccatcagactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctgtatgccctggaccagatgattgccagctgtggccgg
ctggtcaatgaacagaaagagctcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttacctgatctgtgcctgagtcacgcaaatcaattgatg
attatgttgcaaaaccatagaaaactgttggatattaaacagaagtgcaccactgccaaa
caagaactagcaaataatctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gctgatcaagatggagagaaactacaagcattgctccgccttgtaatagagctgttagaa
agagtcaaaattgttgaggctcttagcacagttcctcagatgtattgcttagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagagagtgggctggagctttagtc
aaagatggaaagcagttgtatgaagctgaaaagtccaaaagggaatcttttgggaagtta
tttaggaagtcttttttaagaaatcgtctgtttaggggactggactcctggcccccctcc
ttttgtactcagaaacctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcagaagtgcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttagatgaaatgtcacagacgattacagatctgctgaatgaacaaaaggta
tccacaagtcaggcatccccacagtcggcttcttccccaaggatagaaagtacaacagga
attacaactactacctcaccgaaaactcctcctccgcttactgttcaggatcccttatgt
cctgcagtgtgtcccttagaagaattatctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacacagaacaaactatacaccaagcttctttagacttg
gattcattagctgaaagtcctgagtctgattttatgtctgctgtgaatgagtttgtgata
gaagaaaatttatcatctcctaatcctataagtgatccacaaagtccagaaatgatggtg
gaatcattgtattcatcagtcattaatgcaatagatagtagacgaatgcaggacacaaat
gcgtgtggtaaggaggacttcggagttcatgcttctttgcatgtccagttggaaaaatgt
agagttgttgcccaggacactcacttcagtatacaagccatcaaggaagacctataccac
ttcagaacatttgttcagaaagaacagtgtgacttctcaaattctttaaaatgtactgca
gtagaaataaaaaacattattgaaaaagtaaaatgttctctagaaataacactaaaggaa
aaccatcagaaagaactacagtctttaaagactgaatatgaaggcaagcttgatgctcta
gcaaaggagcgtgaggaaaatgaaaataaaattaaaaaattgaaaggagacttagtttgt
cttgaggaggttttacaaaataaagacaatgaatttgctttggttaaacatgaaaaggaa
gctgtcatctgcatgcaaaatgaaaaggatcagaagttattagagatggaaaatataatg
cacactcagaattgtgaaattaaggaactgaagcagtctcgagaggtcgccctagaagac
ttaaagaagctgcacgtggaaaatgatgagaggatggaattgctgagagcagagcttcag
tgcctggagcagagccacctcaaggaactggaggacacactgcatgtcaggcacacgcag
gagtttgagaaagttgtgacagaccacaaagtatctttggagaaattgaaaaaggaaaat
caacaaagaattgatcagatattggactctcatgcctcaactctccaggaaaaagaacag
cagttacaggaattgaaactcaaggtttccgatttgtcagacatgagatgcaaattagag
gttgaacttgcattaaaggaagcagaaactgatgaaataaaaattttgttggaagaaagt
agaacacagcagaaggaaactttgaaatctcttcttgaaaaagagacagaaagtttgaga
acagaaataaataaactcaatcaaaagattcaagataataatgagaactatcaggtgggc
ttatcagaactaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agcagacatgaagaagagtctaatatccttaaggctgagttagacagtgtaacatctttc
catcaccaagcacttgaaatagaaaaacacctgaaagaacaaattgttgaactgcagagt
aaattggattcagaattgagtgctcttgaaagacaaaaagatgaaaaaataacccaacag
gaagagaaatatgacgctattattcagaactttgagaaagacaaagagaaattggtcatg
agccacaagcaagacagagaacagttaattcagcagcttaattatgagaaagatgaagct
attcagactgcactaaaggaatttgcattggagagagaacttgttgagaaagacttatta
gaaaaacttaaacatcttgaaaatcaaatagccaaaagtcctgcccttgaatctaccaga
gaagattcttcaagcttagttgctgaacttcaagaaaagcttcaggaagaaaaagcaaag
tttctagaacagcttgaagaacaagaaaaaagaaagaatgaagaaatgcagaatgttcgg
acatctttgatcgctgaacagcagaccaattttaacactgttttaacaagagagaagatg
aggaaagagaacataataaatgaccttagtgaaaagttaaagagcacaatgcagcagcaa
gagcgagatagagatttgatagaatcactttctgaagatcgagctcgtttgcttgaggaa
aagaaaaagcttgaagaagaagtcagtaaattgcgtagcagcagttttattccgtcacca
cctatagttgctgccccagagctttatggagcttgtgcgcctgagctcccaggtgacaca
gctaggtcagagacagtagatgaaggaagagtggattcagcaatggacacaagcatgatg
tctgtccaggaaaacattcatctgctttctgaagaaaaacagaggataatgcttttagag
cgaacattgcagttgaaagaagaagaaaacaagcgcttaaatcaaagactgatgtctcag
agcatgtcttcagtctcttccagacattctgaaaaaatagctattagagattttcaggtg
ggagatttggtactcatcatcctagatgagcggcatgacaattacgtgttgttcactgtc
agtcctactctgtattttctgcattcagagtctctgcctgccctggatctgaaaccaggt
gagggcgcttcaggtgcatctagaagaccctgggtccttggaaaagtcatggaaaaggaa
tactgtcaagccaaaaaggcacaaaacagattcaaagttcctttggggacgaagttttac
agagtgaaagctgtttcgtggagtaagaaggtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (57)   

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