KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103744750
Entry
103744750         CDS       T03372                                 
Symbol
Psmc5
Name
(RefSeq) proteasome 26S subunit, ATPase 5
  KO
K03066  26S proteasome regulatory subunit T6
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03050  Proteasome
ngi05010  Alzheimer disease
ngi05012  Parkinson disease
ngi05014  Amyotrophic lateral sclerosis
ngi05016  Huntington disease
ngi05017  Spinocerebellar ataxia
ngi05020  Prion disease
ngi05022  Pathways of neurodegeneration - multiple diseases
ngi05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    103744750 (Psmc5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103744750 (Psmc5)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    103744750 (Psmc5)
   05012 Parkinson disease
    103744750 (Psmc5)
   05014 Amyotrophic lateral sclerosis
    103744750 (Psmc5)
   05016 Huntington disease
    103744750 (Psmc5)
   05017 Spinocerebellar ataxia
    103744750 (Psmc5)
   05020 Prion disease
    103744750 (Psmc5)
   05022 Pathways of neurodegeneration - multiple diseases
    103744750 (Psmc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ngi03051]
    103744750 (Psmc5)
Proteasome [BR:ngi03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     103744750 (Psmc5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 nSTAND3 PRS7_OB RuvB_N TIP49 AAA_18 Mg_chelatase AAA_3 AAA_28 AAA_14 AAA_17 Parvo_NS1 ATPase AAA_33 PhoH FapA IstB_IS21 AAA_24 AAA_7 AAA_25 DUF815 bpMoxR Sigma54_activat RNA_helicase DUF5906 Zeta_toxin AAA_19 AAA_11 TsaE Prominin HR1
Other DBs
NCBI-GeneID: 103744750
NCBI-ProteinID: XP_008844808
UniProt: A0A8C6RAB9
Position
Un
AA seq 406 aa
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcgcttgacgggccggagcagatggaactggaagaggggaaggcaggcagtggactc
cgccaatattacctgtccaagattgaagaactccagttgattgtaaacgataagagccaa
aatctccggagactgcaagcacagagaaatgagctgaatgccaaagttcgtctgttgcgg
gaggaactgcagctgctgcaggaacagggctcctatgttggagaagtagtccgggccatg
gataagaaaaaagtgttggtcaaggtacatcctgagggcaaatttgttgttgatgtggac
aagaacattgacatcaatgatgtaacacccaattgccgggttgctttaagaaacgacagc
tacactctgcataagatccttcctaacaaggtggaccctttggtgtcactaatgatggtg
gaaaaggtgccagattcaacttatgagatgatcggtgggctggacaagcagatcaaggag
atcaaagaagtaattgagctgcctgtgaaacaccctgagctttttgaagcactgggcatt
gcacagccaaagggagtgctgctgtatggacccccaggcactggaaagacactgttggcc
cgagctgtggctcatcatacagactgtacctttattcgtgtctctggctctgaactggta
cagaaattcatcggggaaggggcaaggatggtaagggagctgtttgtcatggcacgagaa
catgctccatctatcatcttcatggatgagattgactctattggctcctcaagactggaa
ggaggctctggaggggacagtgaagtgcagcgcacaatgctggagctgctcaaccagctg
gatggctttgaggccaccaagaacatcaaggttatcatggccactaataggattgatatc
ctggactctgccctacttcgccctgggaggatcgacagaaaaattgaattcccacccccc
aacgaggaggcccggttggacattttgaaaatccactctcgaaaaatgaacttgaccagg
gggatcaacctgagaaaaattgctgaactgatgccaggagcatcgggggctgaagtaaag
ggtgtgtgcacagaagcaggcatgtatgcccttcgggaacggcgagtccatgtcacccag
gaagactttgagatggcagtagccaaggtcatgcaaaaggatagtgagaaaaacatgtcc
atcaagaaactatggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (301)   
   KEGG ORTHOLOGY (1)   
   RefGene (297)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (37)   
   Pfam (37)   
All databases (357)   

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