KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103748093
Entry
103748093         CDS       T03372                                 
Symbol
Vps54
Name
(RefSeq) VPS54, GARP complex subunit
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ngi01009]
    103748093 (Vps54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ngi04131]
    103748093 (Vps54)
Protein phosphatases and associated proteins [BR:ngi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103748093 (Vps54)
Membrane trafficking [BR:ngi04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    103748093 (Vps54)
SSDB
Motif
Pfam: Vps54 Vps54_N SBP_bac_6 YqzH EXOC6_Sec15_N
Other DBs
NCBI-GeneID: 103748093
NCBI-ProteinID: XP_008848853
UniProt: A0A8C6RMB7
Position
Un
AA seq 976 aa
MASSHSSSPVPQGSSSDVFFKKEGEPAKHLRSVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTVYHSKVNLPAALNDPTLAKRESDFFTKTWGLDFVDTEVTPSFYLPQISKEHFITY
QQEISQREKIHERCKNICPPKDTFDRTLLHIHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLGLTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGVHSFRHLGSQLCELEKLIDKMMIAEFST
YSHNDLNRPLEGEWQVLEEERLISLVFGLLKQRKLNFLEIYGEEMIITAKNIIKERVINK
VSQIEEIDTDAVVKLADQMRMLNFPQWIDLLKDIFSKFTIFLQRVKATLNIISNVVLSVL
DKNQRTRELEEISQQKNAAKDNSLDTEVAYLTHEGMFISDAFSEGELAPMAVDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQITSSTPGGIDIMINEDTKLTDLELGKLANSIQE
LLCSASDVCHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFIVDTEQICGRRSMSLL
GALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSIADGKIALPEKKSG
ATEERKPAEVLTVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLTDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQCNMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSPCFRNICKQMTKMHEAI
FDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKG
LKDLDLNMAEIWEQKR
NT seq 2931 nt   +upstreamnt  +downstreamnt
atggcttcaagccacagttcttctccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagagggagagccagcaaaacacctgcgatctgtgcagtcactgccagacgtgtgt
cccaaggaacccacaggtgactcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactgtatatcattccaaagtcaatctcccagcagcattaaatgatcct
acattagcaaaaagagaatctgacttcttcacaaaaacatggggattagactttgtggat
accgaagtcacaccttcattctacctcccacaaatcagcaaggaacattttataacatat
caacaggagatctctcagagagagaagattcatgaaagatgcaagaatatttgtcctcct
aaagatacctttgacaggactcttttacatattcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggatgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcttcaaagttgcttcaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatttctctacgttcagaagcattttttcatgcaatgacctctcaacatgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatcactacatattttaagactgggacttaccaga
aataattgtgttaaagtatacaataaactgaagctaatggccactgtacaccagactcag
cctacagtacaagtattactatctacttctgagtttgtgggagcgctggacttgatagca
acgacgcaagaggttctgcagcaggagcttcagggtgtccacagtttccggcatttgggg
tcacaactttgtgaattagaaaaactgatagataaaatgatgattgcagaattttccact
tactctcacaatgacttaaatagaccactggaaggtgaatggcaagttttagaagaggaa
agattaatatcgcttgtatttggacttttgaaacaaagaaaacttaatttcttagaaatc
tatggtgaagaaatgattattacagcaaagaatatcattaaagagcgtgtgattaataaa
gtttcacaaatagaagaaatagacacagatgctgttgtgaagcttgcagatcaaatgaga
atgttgaattttccccagtggatcgatctgttaaaggatattttctctaagtttacaatt
ttcctacagagagttaaggcaacattgaatatcattagcaatgttgttctctcagttctg
gacaaaaaccaaaggactagagaattggaggagatttcacagcagaagaatgctgcaaaa
gacaattcattggacacagaggtggcttatttaacccacgaaggcatgtttataagtgat
gctttcagtgagggtgaactagcacctatggcagttgatactacctctcaaagaaatgcg
tctccaaatagtgagccctgcagcagtgattcagtgtccgaaccagagtgcactactgat
tcttcatctagcaaagagcagataacatcttccactccaggaggtatagatattatgatt
aatgaagatacaaaattaactgacttagagctggggaaactagcaaacagcatccaggag
ttactgtgcagtgcttcggatgtgtgtcatgatcgcgccgtcaagtttctcatgtcacga
gcaaaggatggttttcttgagaagttaaattccatggaattcataacgctttctagattg
atggaaacatttattgtagacactgaacagatctgtggaagaagaagtatgtcattactt
ggagcacttcagagccaagctaacaagtttgtaaataggtttcacgaggaaaggaaaacc
aagctcagcctcctcttggacaatgagcggtggaagcaagcagacgttcctgcagaattt
caagatcttgttgactctatagcagatggaaagattgctttacctgaaaaaaaatcagga
gccacagaagaaaggaaacctgctgaagttcttactgttgagggacagcagtatgctgtt
gttggaactgtattactgttaataagaatcatccttgaatattgccagtgtgtggacaac
atcccatctgttactactgacatgcttactcggctgacagatttgttgaagtacttcaat
tcaagaagttgccagttagttcttggagctggtgccttgcaggttgttgggctaaaaaca
attactacaaaaaatttggctctttcttcacgatgtttgcagttaattgtgcactacatt
cctgtgatccgggctcattttgaagctcgactaccacctaagcaatgtaacatgcttagg
cattttgatcatatcactaaggattaccatgaccacatagctgaaatatcagctaagctc
gtagcgataatggatagcctgtttgataagctgttgtcaaagtatgaggtgaaagctccc
gttccttccccgtgtttcaggaatatttgtaagcaaatgacaaaaatgcatgaagctata
tttgatcttcttccagaagaacaaacacagatgttatttttaagaattaatgcaagctac
aaactccacttgaaaaagcagttgtctcacttaaatgtaataaatgatggaggacctcaa
aatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaaggc
cttaaagatttggatctaaatatggctgagatctgggaacagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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