KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103751577
Entry
103751577         CDS       T03372                                 
Symbol
Col11a1
Name
(RefSeq) collagen type XI alpha 1 chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04820  Cytoskeleton in muscle cells
ngi04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103751577 (Col11a1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    103751577 (Col11a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ngi00536]
    103751577 (Col11a1)
Glycosaminoglycan binding proteins [BR:ngi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103751577 (Col11a1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 103751577
NCBI-ProteinID: XP_008853288
Position
Un
AA seq 1806 aa
MEPWSSRWKTKRPLWDLTIATLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQISAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQVGVEVGRSPVFLFEDHTGKPAPEEYPIFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLGRSERPIVDTNGITVFGTRILEDEFFEGDIQQFLITDDPKAAYDYCDHYS
PDCDSSASKAAQAQEPQVDEYAPEDIIEYDYEYGETEYKEAESVTETPTVTEETVAQTEA
NIVDDFEDYNYGTMEPYQTESPRRVTGSNEPSPVEEGFTEEYLTGEDYDPQRKISEDTLY
ENKEIDGRDSDLLVDGDLGEYDFYEYKDYEEKATSSPNEEFGPGVPAETDFTETSINAHG
AYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPSGPPGDPGDRGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDR
GFDGLPGLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GPPGQPGIAGIDGPPGPKGNMGPQGEPGPPGQQGNPGPEGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD
GPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA
GNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
GEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP
GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPP
GNPGLPGPQGPKGNKGSSGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHAEN
MQADIVDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG
EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDRKSEGVRISSWPKEKPGSWYSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLTASARQNFTYNCHQSTAWYDVSSASYDKALRFLGSNDE
EMSHDNNPHIKVLYDGCASRKGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKFGFEVG
PACFLG
NT seq 5421 nt   +upstreamnt  +downstreamnt
atggagccgtggtcctccaggtggaaaacgaaacggccgctctgggatctcaccatcgca
accctcgccttgactttcctcttccaagccagagaggtcagaggagctgctccagttgat
gtactcaaagcactagattttcacaattctccagagggtatatcaaaaacaacaggattt
tgcacaaacagaaagaattctaagggttcagatactgcttatagagtttcaaagcaagcg
caaatcagtgccccaacgaagcagttatttccaggtgggacttttccagaagatttttca
atattatttacagtaaaacccaaaaaaggaattcagtctttccttttatctatatataat
gagcacggtattcagcaagttggtgttgaggttgggagatcacctgtttttctattcgaa
gaccacactggtaaacctgccccagaagagtaccccatcttcagaacagttaacatcgcc
gatgggaagtggcatcgggtagcaatcagtgtggagaagaaaactgtgacaatgatcgtt
gattgtaagaagaaaaccacaaaaccactggggagaagtgagagaccaattgttgacacc
aatggaatcacagtgtttggaacaaggattttggaagatgagttttttgagggtgatatc
cagcagttcttaatcacagatgacccaaaggcagcatacgactactgtgaccattacagt
cccgattgtgactcctcagcatccaaagctgctcaggctcaggaaccgcaggtagatgag
tatgcacctgaggatataatcgaatatgactatgaatatggggaaacagaatataaagag
gctgaaagtgtaacagagactcccactgtaactgaggaaacagtagcacaaacagaggca
aatattgtggatgattttgaagattacaactatggaacaatggagccataccagacagaa
tctcctaggcgtgtaactggatccaatgagccaagtccagttgaagaaggttttactgaa
gaatatctaactggagaggattatgatccccagaggaaaatttccgaggatacgctatat
gaaaacaaagaaatagacggcagggactctgatcttctggtagatggagatttaggcgaa
tatgatttttatgaatacaaagactatgaagaaaaagcaacaagttcccctaatgaagaa
tttggccctggtgtcccagcagaaactgatttcacagaaacaagcataaatgcccatggt
gcatatggagagaagggtcagaagggagagccagcagtggttgaaccagggatgcttgtt
gagggaccacctgggccagcaggacctgcgggtcttatgggccctccaggtctccaaggc
ccctctgggccccccggtgaccctggtgataggggccctccgggacgtcctggtttacca
ggagctgatggtctacctggtcctcctggaactatgttaatgttaccgttccgctatggt
ggtgatggctccaaaggacctaccatctctgctcaggaagcccaggctcaggcaattctt
cagcaggctcggattgctttgagaggccctcctggcccaatgggtctaactgggagaccg
ggtcctgtgggtggacctggatcatctggggccaaaggagagagtggtgatccaggtcct
cagggccctcgaggtgtccagggtccacctggtccaacaggaaaacctggaaaaaggggg
cgtccgggtgctgatggtggaagaggaatgcctggagaacctggatccaagggagatcga
ggctttgatggacttccaggtctgccgggcgacaaaggtcacaggggggaaagaggtcct
caaggtcctccaggtcttccaggcgatgatggaatgaggggagaagatggagaaataggg
cccaggggtcttccaggtgaagctggacctcgaggcttgctaggaccacggggaactcca
ggacctccagggcagcctggtattgcagggatagatggccccccaggacctaaaggaaac
atgggtccccaaggggagcctggacctccaggtcaacaagggaatccaggacctgaaggt
cttcccggtcctcaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaacca
gggcttgctggccttcctggtgctgatgggcctcccggtcaccctggaaaagaaggacaa
tctggagaaaagggtgctctgggtcctcctggtccacagggtcctgttggctaccctggt
ccccgaggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaaaag
ggtgaagatggtttcccaggattcaaaggtgacatgggccttaaaggtgacagaggagaa
gtgggtcaaattggtccaagaggagaagatggtcctgaaggtcccaaaggtcgtgcaggc
ccaactggagacccaggtccttctggccaagcaggagagaaggggaaacttggagttcca
ggattaccaggctatccaggaagacaaggtccaaagggttccactggatttcctgggttt
ccaggtgccaatggggagaaaggtgctcggggagttgcaggcaaaccaggccctcggggt
cagcgtggtccaacgggtcctcgaggttccaggggtgcaagaggtcccacagggaaaccc
gggccaaagggcacttcaggtggtgatggccctccaggtcctccaggtgaaagaggccct
caaggaccacagggtccagttggattccccggaccaaaaggcccccctggccctcctggg
aaggacggactgccaggacacccaggacagcgtggagagactggatttcaaggcaagacc
ggtccccctgggccaggaggagtggttggaccacagggaccgactggtgagactggtcca
ataggtgaacggggccaccctggccctcccggccctcccggggagcaaggtcttcctggt
gctgctggaaaagaaggcgcaaagggtgacccaggtcctcaaggtatctcagggaaagat
ggaccagcaggaatacgtggtttcccaggtgaaagaggtcttcctggagctcagggtgca
cctggactgaaaggaggagaaggtccccagggccccccaggtccagttggctcaccggga
gagcgtggttcagcaggcacagcaggcccaattggtttgcctgggcgtccgggaccccag
ggccctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggccct
gcaggacgagatggcgtgcaaggccccgtgggtctgccagggcctgcgggtcctgctggc
tcccctggagaagacggagacaagggtgaaattggtgaaccaggccaaaaaggcagcaaa
ggagacaaaggagaaaacggccctcctggtccgccaggtcttcaaggacctgttggcgcc
cctggaattgctggaggggatggtgagccaggccccagaggacaacaagggatgtttgga
caaaaaggtgatgagggtgctcgtggtttcccaggaccccctggtcctataggtcttcag
ggtctgccaggcccaccaggtgaaaagggtgaaaacggagatgttggccccatgggtcca
cctggtcctcctggcccaagaggccctcaaggccccaatggagctgatggaccacaagga
cccccaggatctgttggttcagttggtggtgttggagaaaagggtgaaccaggagaagca
gggaacccagggcctcccggtgaagcgggcacaggtggtcccaaaggagaaagaggagaa
aaaggagaggctgggccacctggtgctgcaggacctcctggtgctaaggggccaccaggt
gatgatggccccaaggggaacccgggtcctgttggctttcctggagatcctggtccccct
ggggaacctggtcctgcaggtcaagatggtgttggtggtgataagggtgaagatggcgat
ccagggcaaccgggtcctcctggtccatcgggtgaggctggtccaccaggtcctcctgga
aagagaggtcctcctggagctgcaggcgcagagggacgacaaggcgaaaagggggctaag
ggagaagcaggtgctgaagggcctcctgggaaaactggccctgttggacctcaaggtcct
tctggaaagcctggtccagaaggtctgcgaggcatccctggccctgtgggagaacaaggt
cttcctggtgctgctggccaagatggaccccctggtcctatgggacctcctggattacct
ggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggtctc
attggccctccaggagaacaaggggaaaagggggacagaggattgcctgggactcaaggc
tctccaggagcaaagggagatgggggaatcccaggtcctgctggtcccataggcccacct
ggtaacccaggattaccaggtcctcaaggccctaagggtaacaaaggctcttctggtcct
gctggccagaaaggtgacagtggtcttcctgggcctcctggacctccaggtccccctggt
gaagtcatccaacctttaccaatcttgtcacctaagaaaacaagaagacatgctgaaaac
atgcaagccgacatagttgacaatattctggattactcagatggcatggaggaaattttt
ggttctctcaactccctgaaacaagacattgaacatatgaagtttccaatgggtactcag
accaatccagctcgaacttgcaaagacctgcagctcagccatcctgacttcccagatggt
gaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtgtactgtaat
ttcacatctggtggtgaaacgtgcatttatccagacagaaaatctgagggagtaagaatt
tcatcatggccaaaggagaaaccaggaagttggtatagtgaatttaagagaggaaaactg
ctttcatatctagatgttgaaggcaattccattaatatggtgcaaatgacattcctgaaa
ctcctgaccgcctctgcccggcaaaatttcacttacaattgtcatcagtcaactgcctgg
tatgatgtgtcatcagcaagttatgacaaagcacttcggtttctggggtcaaatgatgag
gagatgtcccatgataacaaccctcatatcaaggtgctgtatgacggctgtgcgtccaga
aaaggctacgaaaagactgtgattgaaatcaatactccgaaaattgaccaagtacccata
attgatgtaatgatcaatgattttggtgatcagaaccagaagtttggatttgaagttggt
ccagcttgttttcttggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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