KEGG   Naegleria gruberi: NAEGRDRAFT_5552
Entry
NAEGRDRAFT_5552   CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ngr  Naegleria gruberi
Pathway
ngr03420  Nucleotide excision repair
ngr04120  Ubiquitin mediated proteolysis
ngr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    NAEGRDRAFT_5552
   04120 Ubiquitin mediated proteolysis
    NAEGRDRAFT_5552
  09124 Replication and repair
   03420 Nucleotide excision repair
    NAEGRDRAFT_5552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngr04121]
    NAEGRDRAFT_5552
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_5552
Enzymes [BR:ngr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     NAEGRDRAFT_5552
Ubiquitin system [BR:ngr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   NAEGRDRAFT_5552
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     NAEGRDRAFT_5552
   Cul2 complex
     NAEGRDRAFT_5552
   Cul3 complex
     NAEGRDRAFT_5552
   Cul4 complex
     NAEGRDRAFT_5552
   Cul7 complex
     NAEGRDRAFT_5552
   Cul8 complex
     NAEGRDRAFT_5552
   Cul9 complex
     NAEGRDRAFT_5552
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      NAEGRDRAFT_5552
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      NAEGRDRAFT_5552
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zinc_ribbon_16
Other DBs
NCBI-GeneID: 8858761
NCBI-ProteinID: XP_002678405
JGI: Naegr1_5552
UniProt: D2VBZ5
AA seq 90 aa
KKRFEVKKWNAVALWGWDIVVDSCAICRNHIMELCIECTANQQSATSEECTVAWGVCNHA
FHFHCISRWLKTRHVCPLCNCEWDFQKYGK
NT seq 270 nt   +upstreamnt  +downstreamnt
aagaaacgattcgaagtgaagaagtggaacgctgttgctttgtggggttgggatatcgtc
gtcgactcttgtgctatttgtcgtaaccacatcatggaactttgtattgaatgtactgct
aaccaacaatctgccaccagtgaagaatgtaccgttgcttggggtgtttgtaatcacgct
ttccacttccactgtatttcaagatggttaaagaccagacacgtttgcccattgtgtaac
tgcgaatgggatttccaaaagtacggaaaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (73)   

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