KEGG   Naegleria gruberi: NAEGRDRAFT_67812
Entry
NAEGRDRAFT_67812  CDS       T01241                                 
Name
(RefSeq) ran family small GTPase
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ngr  Naegleria gruberi
Pathway
ngr03008  Ribosome biogenesis in eukaryotes
ngr03013  Nucleocytoplasmic transport
ngr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NAEGRDRAFT_67812
   03008 Ribosome biogenesis in eukaryotes
    NAEGRDRAFT_67812
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    NAEGRDRAFT_67812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_67812
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_67812
   03016 Transfer RNA biogenesis [BR:ngr03016]
    NAEGRDRAFT_67812
   03036 Chromosome and associated proteins [BR:ngr03036]
    NAEGRDRAFT_67812
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngr04147]
    NAEGRDRAFT_67812
   04031 GTP-binding proteins [BR:ngr04031]
    NAEGRDRAFT_67812
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     NAEGRDRAFT_67812
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    NAEGRDRAFT_67812
  Pre-60S particles
    NAEGRDRAFT_67812
Transfer RNA biogenesis [BR:ngr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    NAEGRDRAFT_67812
Chromosome and associated proteins [BR:ngr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     NAEGRDRAFT_67812
   Spindle formation proteins
    NAEGRDRAFT_67812
Exosome [BR:ngr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NAEGRDRAFT_67812
GTP-binding proteins [BR:ngr04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    NAEGRDRAFT_67812
SSDB
Motif
Pfam: Ras Roc Arf NB-ARC AAA_24 PduV-EutP MMR_HSR1 DUF815 Sigma54_activat AAA_22 TsaE RsgA_GTPase AAA_16 AAA_18 ATP_bind_1 nSTAND3 TrwB_AAD_bind
Other DBs
NCBI-GeneID: 8856724
NCBI-ProteinID: XP_002677020
JGI: Naegr1_67812
UniProt: D2VG08
AA seq 330 aa
MDDDQGEEIKQVHLIDNFSIRQVRYIIRDELLKFIVKYENSLTREGILKKNQVSRNSNNQ
ENIVVDDTKSMNEGSTIENQRLMELFQSRLELFNFYFSHFYRKLPSVNASESTNKQISIV
SSLFQHKDQLVDSSSTLNNNTETKKILIIGDGGVGKTTFCRSMNDDFQFDKRYLVTMGCE
VNSYQLKIGNLETNLNLWDTAGPEKFGALRDAYYVNASACIISFDLTSRITYKNTPNWFR
AIKRVEPECEVIIVGMKLDQTDNIKVQPKHIIFPRKKYCPYIALSCLQQVNNRAVMWYAA
LISHFVSNLKGVPETPTCNECNKEQFDFNL
NT seq 993 nt   +upstreamnt  +downstreamnt
atggatgatgatcaaggggaggaaattaaacaagtccatttgattgataatttttcaatt
agacaagttcgatatattattagagatgaattattgaaatttattgtaaagtatgaaaat
tcattgacaagagagggaattttaaagaagaatcaagtatcaagaaattccaataatcag
gaaaatatagttgttgatgatactaaatcaatgaatgagggttccacaattgagaatcaa
cgtttaatggaattatttcaatcgagattggaactgttcaacttttacttttcacatttc
tataggaaattaccaagtgtgaatgcaagtgaatcaactaacaagcaaatttccatagtt
tcttccttatttcaacataaggatcaattggttgactcttcatcaactttaaacaacaat
actgaaacgaaaaagattttgattattggagatggtggagttggaaaaactacattttgc
agatcaatgaatgatgattttcagtttgataaacgatatctagtaactatgggatgtgaa
gtcaattcgtaccaattgaaaattggcaatttggaaacaaatctcaatttatgggataca
gctggtcctgaaaaatttggtgcactcagagatgcctattatgtaaatgcttcagcgtgt
atcattagctttgatcttacgagtagaatcacttataaaaatacgccaaattggttcaga
gctatcaaacgagtggaacctgaatgtgaagtgattattgttggaatgaaactagatcaa
accgacaatataaaggtacaacccaagcatattatctttccacgtaaaaagtattgtcct
tatattgcattgagttgtcttcaacaggttaataatcgtgcagtaatgtggtatgcagct
ttgattagtcattttgtttcgaatttgaaaggtgttcctgaaactccaacttgcaatgaa
tgcaataaggaacaattcgattttaacctttag

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Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (46)   

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