KEGG   Nocardiopsis gilva: CDO52_03025
Entry
CDO52_03025       CDS       T05022                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ngv  Nocardiopsis gilva
Pathway
ngv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CDO52_03025 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngv03400]
    CDO52_03025 (nth)
Enzymes [BR:ngv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CDO52_03025 (nth)
DNA repair and recombination proteins [BR:ngv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CDO52_03025 (nth)
 Prokaryotic type
     CDO52_03025 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: ASU85995
UniProt: A0A223SD26
Position
602362..603102
AA seq 246 aa
MPTPAESTEAPASPTGESRLALVRRARRINRELTRLYPDAHCELDFTNPLELLVATILSA
QCTDKRVNAVTPTLFARYRTAADYAAADREELEGIIRSTGFFRAKANSIISLGQQLCERH
GGDVPGTLNALVRLPGVGRKTANVVLGNAFDVPGLTVDTHFGRLVRRFRWTEATDPVKVE
HEVGALFPPKDWTMLSHRLIWHGRRVCHARRPACGACELARLCPSFGEGPTDEETARKLV
RNGPFS
NT seq 741 nt   +upstreamnt  +downstreamnt
atccctacgccagccgagtcgaccgaagcccccgcgtctcccacgggcgaatcgcggctc
gcgctggtgcgtcgcgcccgtcgcatcaaccgggaactgacccggctgtacccggacgcg
cactgtgaactcgacttcaccaatccgctcgaactgctggtcgccacgatcctgtccgcg
cagtgcaccgacaagagggtgaacgcggtcactccgacgctgttcgcgcggtaccggacc
gcggccgactacgcggccgccgaccgggaggaactagaggggatcattcgctccacgggc
ttcttccgagccaaggcgaacagcattatcagcctgggacagcagctgtgcgagcggcac
ggcggcgatgtccccggaactctgaatgccctggtgagactacccggtgttgggaggaaa
acggcaaacgtcgtgctcggcaacgctttcgacgtcccaggactcaccgtggacacccac
ttcggacggctggtccgccgcttccgctggacggaggcgaccgaccccgtcaaggtcgag
cacgaggtcggcgcgctcttcccacccaaggactggaccatgctgtcccaccggctcatc
tggcacggccgccgcgtctgccacgcccgccgcccggcgtgcggggcctgtgagctggcg
cggctgtgtccctccttcggcgaggggccgacggacgaggagaccgcgcgcaagctcgtt
cggaacggcccgttctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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