KEGG   Nocardiopsis gilva: CDO52_19150
Entry
CDO52_19150       CDS       T05022                                 
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
ngv  Nocardiopsis gilva
Pathway
ngv00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CDO52_19150
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ngv01007]
    CDO52_19150
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ngv03016]
    CDO52_19150
Enzymes [BR:ngv01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     CDO52_19150
Amino acid related enzymes [BR:ngv01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   CDO52_19150
Transfer RNA biogenesis [BR:ngv03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CDO52_19150
 Prokaryotic type
    CDO52_19150
SSDB
Motif
Pfam: B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind
Other DBs
NCBI-ProteinID: ASU84635
UniProt: A0A223S930
Position
complement(4255442..4257973)
AA seq 843 aa
MRVPVSWLREYVELPADVTPRDLAAKLIAAGLEVETVDEVGADISGPIVIGRVREIEELT
GFKKPIRYCRVDVGTANGSGEKQNIICGARNFSEGDLVVVALPGAELPGGFTIGSRKTYG
RMSEGMICSAAELALWEDHEGIIVLPEDFGAPGTDLYGPLGLREDVLDIAVTPDRGYALS
MRGVARDVAALYELPFHDPAEVRVDGTPGAGYPASVVGPEDATGAAICANYVLRGATGFD
ADAPTPLWMKRRLALTGVRSISLAVDVTNYVMMELGQPLHAWDRAKLRGPIEVRLARVGE
RLETLDHVKRTLDPDDILITDESGPINIAGVMGGLDTEISMTSTDVIVEAAHFDDRHIAR
TSRRHQLSSESSRRFERGIDSQLQLAAATRAARLLGELGGASVEDGYTHIDLSTPREPIA
LSADHPGTVAGVAYARERVIRRLVEVGCEVADHQERADTLRVTPPSWRPDLTDPNDLAEE
VIRLEGYENIPSIPPRAPAGRGLTPSQRLRRSVGRGLAGAGFTEVLSYPFVGERDFDGLQ
LDADDARRRTLKLANPLNDDEPLLRTTLLPGLLKTLARNVGRGFADVALFETGLVYRPKP
GAPEQAPMLRVDRGPTAEELASVEAALPDQPRRVGAVLAGDREPSGWWGEGRAATWADAI
EAAREVGRAAGAELTVRADQHAPWHPGRCAALYVAAEGSEGKEILVGHAGELHPRVITAY
GLPPRTVAMEVELDRIERVVAPVRAPEVSTYPVATQDVALVVDAAVPSGEVERALRDGAG
ELLESVRLFDVYTGEQVGAGRKSLAYTLRLRAGDRTLTAEESTAARDAAVAAATERTGAV
LRG
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgcgcgtccccgtttcctggctgcgggagtacgtcgagttgccggccgacgtcaccccc
cgcgacctcgccgccaagctgatcgccgccggactggaggtcgagaccgtcgacgaggtc
ggcgccgacatctccggcccgatcgtcatcggccgcgtacgcgagatcgaggagctcacc
ggcttcaagaagccgatccgctactgccgcgtggacgttggcacggccaacggctccggc
gagaagcagaacatcatctgcggcgcccgcaacttctccgagggcgacctcgtcgtcgtc
gcgctgcccggcgccgaactgcccggcggcttcaccatcggctcccgtaagacctacggc
aggatgtccgagggcatgatctgctcggccgccgagctcgccctgtgggaggaccacgag
ggcatcatcgtgctgcccgaggacttcggcgcaccgggtaccgacctctacggcccgctc
gggctgcgcgaggacgtcctggacatcgccgtcacccccgaccgcggctacgccctgtcc
atgcggggggtggcgcgcgacgtcgccgccctctacgaactgccgttccacgaccccgcc
gaggtccgcgtcgacggaacgcccggagcgggctaccccgcctccgtggtcgggccggag
gacgccaccggcgcggccatctgcgccaactacgtgctgcgcggcgccaccgggttcgac
gccgacgcccccacgccgctgtggatgaagcgccgcctggcgctgacgggcgtgcgctcg
atctcgctggcggtcgacgtcaccaactacgtgatgatggagctgggccagcccctgcac
gcctgggaccgcgccaagctgcgcggccccatcgaggtgcggctcgcccgcgtcggcgag
cggctggagacgctcgaccacgtcaagcgcaccctggaccccgacgacatcctcatcacc
gacgagtcgggaccgatcaacatcgccggcgtcatgggcggtctcgacaccgagatcagc
atgacctccaccgacgtgatcgtcgaggcggcccacttcgacgaccggcacatcgcccgc
acctcccggcggcaccagctctcctcggagtcctcgcgccgcttcgagcggggcatcgac
tcccagctgcagctggcggccgccacccgggcggcgcgactgctgggcgaactgggcggg
gcgagcgtcgaggacggctacacccacatcgacctgagcaccccccgcgagccgatcgcc
ctgagcgccgaccatcccggcacggtcgcgggcgtcgcctacgctcgcgagcgcgtcatc
cgccgactcgtcgaggtgggctgcgaggtcgccgaccaccaggagcgggccgataccctc
cgggtcaccccgccgtcgtggcgccccgacctcaccgaccccaacgacctcgccgaagag
gtcatccggctggagggctacgagaacatcccctccatcccgccgcgggccccggccggg
cgcgggctcaccccgagccagcgcctgcgccgctccgtcggccgggggctggccggtgcg
ggcttcaccgaggtactgagctacccgttcgtcggcgagcgcgacttcgacgggctgcag
ctcgacgccgacgacgcgcggcgccgcacgctgaagctcgccaacccgctcaacgacgac
gagccgctgctgcgcaccacactgctgccgggcctgctcaagaccctggcacgcaacgtt
ggccgcggcttcgccgacgtcgccctgttcgagacaggcctggtctaccggcccaagccc
ggcgcgccggagcaggcaccgatgctgcgcgtcgaccgcggccccacggccgaggagctg
gcgtccgtggaggccgccctgcccgaccagccgcgccgcgtgggcgcggtcctggccggt
gaccgcgagccctccggctggtggggcgaaggccgcgccgcgacgtgggccgacgccatc
gaggccgcccgcgaggtgggccgcgccgccggtgcggagctgaccgtccgcgccgaccag
cacgccccgtggcacccgggccgctgcgccgccctgtacgtggccgcggaggggagcgag
ggcaaggagatcctcgtggggcacgccggtgagctgcacccgcgggtcatcacggcctac
ggcctgccgccgcgcaccgtcgcgatggaggtcgagctcgaccgcatcgagcgcgtcgtg
gccccggtccgcgccccggaggtgtccacctacccggtggccacccaggacgtggcgctc
gtggtcgacgccgcggtgccctccggcgaggtcgagcgcgcgctgcgcgacggcgccggc
gaactgctggagagcgtgcggctgttcgacgtctacaccggcgagcaggtcggtgcgggc
cgcaagtcgctcgcctacacgctgcgcctgcgcgccggcgaccggacgctgacggcggag
gagagcacggccgcgcgcgacgccgccgtggccgccgccaccgagcgcacgggggcggtc
ctgcgcggttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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