KEGG   Nitrobacter hamburgensis: Nham_1587
Entry
Nham_1587         CDS       T00348                                 
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
nha  Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:nha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nha03032]
    Nham_1587
   03036 Chromosome and associated proteins [BR:nha03036]
    Nham_1587
   03400 DNA repair and recombination proteins [BR:nha03400]
    Nham_1587
DNA replication proteins [BR:nha03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Nham_1587
Chromosome and associated proteins [BR:nha03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Nham_1587
DNA repair and recombination proteins [BR:nha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Nham_1587
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ABE62408
UniProt: Q1QMY9
Position
1790844..1791176
AA seq 110 aa
MTGSGKTVTRVDLCEAVYKKVGLSRTESSAFVELVLKEITDCLEKGETVKLSSFGSFMVR
KKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINGNSNGNGADTKAD
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaccggaagcggaaaaacagtcactcgtgtcgatctctgcgaagccgtctacaaaaag
gtgggactgtcgcggaccgagtcgtccgcgttcgtggagctcgttctcaaggagatcacc
gactgcctggagaagggcgagacggtgaagttgtcgtcgttcgggtcgttcatggtgcgc
aagaaaggccagcgtatcggccgcaatcccaagaccggcacggaggttccgatctctccg
cgtcgcgtgatggtattcaagccgtcggctattctgaagcagcggatcaacggtaacagc
aacggcaacggcgccgacaccaaggctgactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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