KEGG   Nitrobacter hamburgensis: Nham_3734
Entry
Nham_3734         CDS       T00348                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha00061  Fatty acid biosynthesis
nha00071  Fatty acid degradation
nha01100  Metabolic pathways
nha01212  Fatty acid metabolism
nha02024  Quorum sensing
Module
nha_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:nha00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Nham_3734
   00071 Fatty acid degradation
    Nham_3734
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nham_3734
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:nha01004]
    Nham_3734
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nha04147]
    Nham_3734
Enzymes [BR:nha01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Nham_3734
Lipid biosynthesis proteins [BR:nha01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Nham_3734
Exosome [BR:nha04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Nham_3734
  Exosomal proteins of breast cancer cells
   Nham_3734
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: ABE64458
UniProt: Q1QH39
Position
complement(4113108..4114790)
AA seq 560 aa
MDRIWLSQYPAGVPADIDASQYASLVALLEESFAKFRDRKAFICMGKAITYREIDEMSLA
LGAWLQGRGLKKGARVALMMPNVLQYPVSTVAVLRAGYAVVNVNPLYTPHELEHQLKDSG
AEAIIVLENFASTVQQAIGKTNIRHVIVGSMGDLLGFKGLIVNFVVRHVRKMVPPSSIPG
AVKFNDALAAGRGMTLARPNLAPDDVAFLQYTGGTTGVAKGATLLHRNILANMLQNDAWL
QPALRKPPVVDQLFVVCALPLYHVFALTACFMLAMRAGGVNLLIPNPRDMPGLVKELMKY
QINCFPAVNTLYNGLLNARGFDKVDFSKLKASVGGGMAVQKAVAEKWLRVTGCPLLEGYG
LSETSPTLTCNPADTGKFSGSIGLPMPSTYISIRDDDGREVPLGEAGEICAKGPQVMPGY
WNRPDETAKVMTADGFFRTGDIGVMSADGYTRIVDRKKDMILVSGFNVYPNEIEDVIASH
PGVLECAVIGVKDRKSGEAVKAFVVRKDPTLTRADIIKFAHTQLTGYKVPRQIEFRDSLP
KTNVGKILRRELRDEKKAAA
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggatcgcatctggctcagtcaatatcccgcaggcgtgcccgccgacatcgacgcgtcg
cagtacgcctcgctggtcgcgttgcttgaagagagcttcgccaaattccgcgatcgcaag
gccttcatctgcatgggcaaggcgatcacctatcgcgagatcgacgagatgtcgcttgca
ctcggcgcctggctgcaaggccggggactgaaaaagggcgcgcgcgttgcgctgatgatg
ccgaacgtgctgcaatatccggtctcgacggtggcggtgctgcgcgccggctatgccgtg
gtcaacgtcaacccgctctacacaccgcacgagcttgagcaccagctcaaggattccggc
gcggaagcgatcatcgtactggagaatttcgcgtcgacggtgcagcaggcgatcggcaaa
actaacatcaggcacgtcatcgtcggcagcatgggcgacctgctcggcttcaagggcctg
atcgtcaatttcgtggttcgtcatgtcaggaagatggtgccgccgtcatcgatcccgggg
gcggtcaagttcaacgacgccctcgcggccgggcgcggcatgacgcttgccaggccgaac
ctcgcgcccgacgacgtcgccttcctgcagtataccggcggcaccaccggcgtcgcgaag
ggcgcgacgctgcttcatcgcaatattctcgccaacatgctgcagaacgacgcctggctg
cagccggcgctgaggaaaccgccggtggtcgatcaactcttcgtcgtctgcgcgctgccg
ctctatcacgtcttcgcgctgacggcgtgcttcatgctggcgatgcgcgcgggcggcgtc
aatctgctgatcccgaacccgcgcgacatgcccggcctcgtcaaggaattgatgaagtat
cagatcaactgctttccggcggtgaacacgctctataacggccttctcaatgcgcgcggt
ttcgacaaggtcgacttctcgaaactcaaggcttcggtcggcggcggcatggcggtccag
aaggcggtggcggagaagtggctgagggtgacaggatgcccgctactggaaggctatggc
ctttcggaaacctcgccgacgctgacctgcaatcccgccgacaccggcaaattctccggc
tcgatcgggcttcccatgccgtcgacatacatttccatccgcgacgacgacggccgcgag
gtgccgctcggcgaggcgggcgaaatctgcgccaagggtccacaggtgatgccgggctac
tggaaccggccggacgaaaccgcaaaggtgatgacggcggacggcttcttccgtaccggc
gacatcggcgtgatgtcagccgacggctacaccaggatcgtcgaccgcaagaaggacatg
atcctggtctccggcttcaatgtctatccgaacgagatcgaggacgtgatcgcgagccat
ccgggcgtgctggaatgcgcggtgatcggcgtcaaggacaggaagtcgggcgaggcggtg
aaggctttcgtggtcaggaaggacccgaccctcacgcgcgcggacatcatcaagttcgcg
catacgcagttgaccggctacaaggtgcccagacagatcgagttccgcgactccctgccg
aaaaccaacgtcggcaagatcctccgccgcgaactgcgtgacgagaaaaaagcggcggcg
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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