KEGG   Nitrobacter hamburgensis: Nham_4566
Entry
Nham_4566         CDS       T00348                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nha00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nham_4566
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nha02044]
    Nham_4566
Enzymes [BR:nha01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Nham_4566
Secretion system [BR:nha02044]
 Type IV secretion system
  Trb secretion system protein
   Nham_4566
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_29 ABC_tran DEAD DUF87 AAA_10 AAA_23 ATPase_2 AAA_16 FtsK_SpoIIIE nSTAND3 T2SSE Nup49_C AAA CbiA Zeta_toxin MC4
Other DBs
NCBI-ProteinID: ABE65141
UniProt: Q1QF56
Position
p3:complement(21435..23888)
AA seq 817 aa
MVALRSFRHPSPSFADLVPHAGLVANGIVLLKDGSLMAGWYFAGPDSESSTDAERNEVSR
QINTILSRLGSGWMIQVEAVRVPTTDYPARQDCHFPDPVTRAIDDERRARFEAERGHFES
RHAIILTWRPPERRRAGLARYIYSDVESRSASYADTAIETFQNAIREIEQYLASVLSIQR
METREVDERDGTRVARYDELFQFIRFCITGENHPVRLPDIPMYLDWLATAELQHGLSPMV
ENRFLGVVAIDGFPAESWPGILNSLDLMPLTYRWSSRFMFLDDQDARQKLERTRKKWQQK
VRPFIDQLFQTQSRSIDQDAAAMVAETEDAIAEASSQLVAYGYYTPVIVLFDDNSTRLQE
KTEAVRRLIQAEGFGARIETLNATEAFLGSLPGNWYANIREPLINTRNLADLIPLNAVWS
GSPTAPCPFYPPNSPPLMQVASGSTPFRMNLHVDDVGHTLVFGPTGSGKSTLLALIAAQF
RRYAGAQIFAFDKGRSMMPLTLAAGGDHYEIGGDDADGSAALAFCPLSDLSTDTDRAWAS
EWIETLVAVQGVTITPDHRNAISRQIGLMAEARGRSLSDFVSGVQMREIKDALHHYTVDG
PMGQLLDAESDGLELGSFQTFEIEQLMNMGERNLVPVLTYLFRRIEKRLTGAPSLIILDE
AWLMLGHPVFRDKIREWLKVLRKANCAVLLATQSISDAERSGIIDVLKESCPTKICLPNG
AAREPGTRKFYERIGFNDRQIEIVATAVPKREYYVASPEGRRLFNMALGPVALSFVGASG
KDDLKRILALKKDSTDWPVYWLKERGIGHAETLLADS
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggtcgcgctgcgctccttccgacacccctcgccgtccttcgccgatctcgtgcctcac
gcgggtctggtcgccaacggcatcgtcctgttgaaggacggctcgctgatggccggctgg
tatttcgcggggccggactcggagagctcgaccgacgccgagcgcaacgaggtctcgcgc
cagatcaacactattctttcgcgtctcggatccggctggatgatccaggtcgaggcggtg
cgcgtgccgaccacggattatccggcacggcaggattgccatttcccagatccagtaacg
cgcgcgatcgacgacgaacgccgcgcccgttttgaggcggagaggggacatttcgagagt
cggcacgcgatcatcctgacctggcggccgccggagcggcggcgcgctggtctcgcgcgc
tacatctactccgatgtcgaaagccgctcggcctcctatgccgacacggcgatcgagacc
tttcagaacgcgatccgtgagatcgagcaatatctcgccagcgttctgtcgatccagcgc
atggaaacgcgcgaggtcgacgagcgggatggcacgcgcgtcgcgcgctatgacgagctc
tttcagttcatccgcttctgtatcaccggcgagaaccatccggtccgcttgccggatatc
ccgatgtatctcgactggctcgcgaccgccgaacttcagcacggcctgtcgcccatggtc
gagaaccgctttctcggcgtggtggcgatcgacggctttccggccgagagctggccgggg
attctcaactcgctcgatctgatgccgctcacctatcgctggtcgtcgcgtttcatgttc
ctcgacgatcaggatgcccgccagaagctcgagcgcacccgcaagaagtggcagcagaag
gtacggcccttcattgaccaactgttccagacccaaagccgatcgatcgaccaggatgcg
gccgcgatggtggcggagacggaggatgccatcgccgaagcctcctcgcagctcgtcgcc
tatggctattacacgccggtcatcgtgctgttcgacgacaacagcacgcgcctgcaggag
aagacggaagccgtgcgccgcctgatccaggcggaaggttttggcgcgcgcatcgagacg
ctgaacgcgaccgaagccttcctcggcagcctgccgggtaattggtacgccaatatccgc
gagccactcatcaacacgcgcaacctcgcggacctcatccccctcaacgcggtgtggtcg
ggcagtccgaccgcgccgtgcccattttatccgccaaactcgccgcccttgatgcaggtc
gcgtccggctcgacacccttccggatgaaccttcatgtcgacgatgtcgggcatacgctg
gtgttcggcccgaccggctccggtaagtcaaccttgctggcgctgatcgcggcgcagttt
cgccgttacgccggcgcgcagatcttcgctttcgacaagggccgctcgatgatgccgctg
acgctcgccgccggcggcgaccattacgagattggcggcgacgatgcggacggctcagcc
gcactcgccttttgtcccctctccgatttgtcgacggacaccgatcgcgcctgggcctca
gaatggatcgagacgctcgtcgccgtgcagggcgtgacgatcacgcccgatcaccgcaat
gccatctcgcgacagatcgggctgatggccgaggcgcgcgggcgatcgctgtcggatttt
gtctcgggcgtgcagatgcgcgagatcaaggatgcgctgcatcattacacggtcgacggc
cccatgggccaattgctcgatgcggaatcggacgggctggagctcggatcattccagacc
ttcgagatcgagcagttgatgaacatgggcgagcgcaacctcgtcccggttctcacatac
ctattccgccgcatcgaaaagcggctgacgggcgcgccgagcctgatcattctcgatgag
gcctggctgatgctcggccatccggtcttccgcgacaagattcgggaatggctgaaggtg
ctgcgcaaagccaattgcgccgtgctgctcgcgacgcagtcgatctccgacgccgagcgc
tccggcatcatcgacgtgctgaaagaaagttgcccgacaaaaatttgcctgccgaacggc
gccgcccgggagcccgggacgcgcaagttctacgagcgcatcggcttcaacgatagacag
atcgagattgtcgcgaccgcagtgcccaagcgcgaatactacgtggcttcgcccgagggc
cgccgtctcttcaacatggcgctcggcccagtcgcgctgtccttcgtcggcgcatccggc
aaggacgacttgaagcgcattttggcgctgaagaaggacagcaccgattggcccgtttac
tggctcaaggaaagggggatcggccatgccgagacgcttctcgccgattcatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (29)   

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