KEGG   Nitrobacter hamburgensis: Nham_4567
Entry
Nham_4567         CDS       T00348                                 
Name
(GenBank) Conjugal transfer TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
nha  Nitrobacter hamburgensis
Pathway
nha02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nha00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nham_4567
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nha02044]
    Nham_4567
Secretion system [BR:nha02044]
 Type IV secretion system
  Trb secretion system protein
   Nham_4567
SSDB
Motif
Pfam: VirB3 DUF2207_C
Other DBs
NCBI-ProteinID: ABE65142
UniProt: Q1QF55
Position
p3:complement(23898..24197)
AA seq 99 aa
MAEAGAELRRNRIHRALSRPNLLFGADRELVLLTGLAAVILIFVVLTWYAAILGAAIWIV
VVAALRMMAKADPMMRRVYARHISYRPNYRATSTPWRRY
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctgaggccggggccgaactccgacgcaaccgcattcatcgcgcgctgtcgcggccg
aacctgctgttcggcgcggatcgcgagctcgtcctgctcacgggcctcgccgccgtgatc
ctgatcttcgtcgtgctcacctggtatgcggcgatcctcggcgccgcgatctggatcgtc
gtcgtggcggcgctgcggatgatggccaaagccgacccgatgatgcggcgcgtctatgcc
cggcacatctcctaccggccgaactaccgggcgacgtcgacgccctggcggcgttactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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