KEGG   Nitrobacter hamburgensis: Nham_4569
Entry
Nham_4569         CDS       T00348                                 
Name
(GenBank) type II secretion system protein E
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nha00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nham_4569
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nha02044]
    Nham_4569
Enzymes [BR:nha01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Nham_4569
Secretion system [BR:nha02044]
 Type IV secretion system
  Trb secretion system protein
   Nham_4569
SSDB
Motif
Pfam: T2SSE FtsK_SpoIIIE ResIII AAA_30 AAA_19 ABC_ATPase DEAD AAA_29 AAA_28 AAA_16 nSTAND3 NACHT cobW Zeta_toxin AAA_22 GpA_ATPase PhoH Sigma54_activat TrwB_AAD_bind AAA_23 IstB_IS21 SLFN-g3_helicase Mg_chelatase RNA_helicase ATP_bind_1 MukB NTPase_1 TsaE AAA ApeP-like UvrD-helicase Bac_DnaA ABC_tran
Other DBs
NCBI-ProteinID: ABE65144
UniProt: Q1QF53
Position
p3:complement(24551..25540)
AA seq 329 aa
MTAGALVMAELRSHPRLVRKLHDALGDQICAALDDTSVVEVMLNPDGRLFIERLGQGMAS
AGTMAAATAEIIIGSVAHALRSEADDERPIISGELPIGGHRFEGLLPPVVGGPAFTIRKR
ASRLFDLDDYVTQGVMTADQVAVVRNAIVSRLNIVVSGGTGSGKTTLANAVIAAIVAHAP
EQRLVILEDTAEIQCAAENAVSLHTSDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLL
KAWNTGHPGGITTIHANSAHSALRRLEQLTAEASQQAMREVIGEAVDLIVSIERTDRGRQ
VRDVLHVESYSAGQYQTESCARKEQRHVA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaccgccggcgccctggtcatggccgaacttcgttcccatccgcggcttgtccgcaag
ctccacgacgcattgggcgaccagatctgcgccgcgctcgacgacacgagcgtcgtcgaa
gtgatgctcaatccggacggccggctgttcatcgaacggctcgggcaggggatggcgtcg
gccggcacgatggcggctgcgaccgccgagatcatcatcggcagcgtcgcgcacgcgctg
cgatcggaggcggacgacgagcgcccgatcatttccggggaactgccgatcggcggccat
cgcttcgagggcctgctgccgcccgtcgttggtgggcccgcctttacaatccgcaagcgg
gcgtcgcgcctgtttgatctcgatgattacgtgacgcaaggcgtcatgaccgccgaccag
gtcgcggttgtccgcaatgccattgtctcgcgcctgaacatcgtggtgtccgggggcacc
ggctcgggcaagaccacgctcgccaatgccgtgatcgccgcgatcgttgcgcatgcgccg
gaacagcgtctcgtcatcctcgaagatacggccgagatccagtgcgcggccgagaacgcc
gtctcgcttcacacaagcgacacggtcgacatggcgcgtctgctcaagagcacgatgcgg
cttcggccggatcgcatcatcgtcggagaagtgcgcgatggcgccgcgctgacgctgctc
aaggcctggaacaccggccatcccggcggcatcacgaccatccacgccaacagcgcccat
tccgcgctgcgtcgtctcgagcagctgacggccgaagccagccaacaggccatgcgcgag
gtcatcggcgaggcggtcgatctgatcgtctcgatcgaacgcacggatcgcggccgccaa
gtccgcgacgtgctgcatgtcgagagctactcggcaggccagtaccagaccgaatcctgc
gcccggaaggagcagcgccatgtcgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (44)   

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