KEGG   Nitrobacter hamburgensis: Nham_4672
Entry
Nham_4672         CDS       T00348                                 
Name
(GenBank) TRAG protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
nha  Nitrobacter hamburgensis
Pathway
nha03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nha00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Nham_4672
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nha02044]
    Nham_4672
Enzymes [BR:nha01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Nham_4672
Secretion system [BR:nha02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Nham_4672
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ABE65226
UniProt: Q1QEX1
Position
p3:complement(118888..120813)
AA seq 641 aa
MKARKIALAIAPAILMAVLCLATTGAESWLARFGTTPGGRMLLGRIGLALPYALPAAAAV
IFLFAAAGANAIRAAGWGVVTGGCLVVVIAASREIARLHSFADAVPAGERLLAYADPSTI
GGATIAALVAAFGLRVAMRGNAAFAAAAPRRIRGRRAIHGESDWMAMTEAARLFAEAGGI
VVGERYRVDQDAVADRAFRADEADTWGAGGKSPLLCFDASFGSSHAIVFAGSGGFKTTSV
TVPTALKWGGGLVVLDPSNEVAPMVLTHRRNAGRQAFVLDPRSPEGGFNVLDWVGQHGAT
KEEDIAAVASWIMTDNPRQGSARDDFFRASALQLLTALVADICLSGHTEKKDQHLRQVRA
NLSEPEPKLRQRLQAIYDNSASGFVKENVAPFIAMTPETFSGVYANAAKETHWLSYANYA
ALVSGSSFTTAELADGQTDIFINLDLKTLENHPGLARVIIGSLLNAIYNRNGEVSGHTLF
LLDEVARLGYLRILETARDAGRKYGITLLMLYQSIGQMREAYGGRDATSKWFESASWISF
SAINDPETADYISKRCGDTTVEADQLSRSSQMSGSSRTRSKQLARRPLIMPHEVLRMRTD
EQIVFTAGNPPLRCGRAIWFRRRDMKACTGQDPYHRSEAVR
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgaaggcacgtaagatcgccctcgcgattgcgccggccatcctcatggcggtgctgtgc
ctcgccacgaccggtgcggaatcgtggctggcgcggttcggaacgacgccgggcggccgg
atgctgctcggccggatcggcctcgccctgccctatgcactgccggccgcagccgccgtc
atcttcctgttcgcggcggccggcgccaacgcgatccgcgcggcgggatggggtgtcgtg
accggcggctgtctcgtcgtcgtcattgccgcttcgcgcgagatcgcgcgcctgcattcc
ttcgccgacgccgtgccggccggagaacggcttcttgcctatgccgatccctcgaccatc
ggcggggcgacgatcgcggcgctcgtggccgcgttcggattgcgcgtggcgatgcgcggc
aatgccgcgttcgcggcggccgcgccacgccgcatccggggacggcgcgccatccatggc
gaatccgactggatggcgatgaccgaggccgcgcggctgttcgccgaggccggcggcatc
gtggtcggcgagcgctatcgcgtcgatcaggatgcggtcgccgaccgtgcctttcgcgcc
gacgaggcggacacatggggagccggcggcaaatccccgctactctgtttcgatgcctcc
ttcggctcgtcgcatgccatcgtcttcgcgggctccggcggcttcaagacgacgtctgtg
acagtgccgaccgcgctcaaatggggtggcggcctggtcgtcctcgatccgtccaacgaa
gtcgcgccgatggtcttgacgcatcggcggaacgccggccgtcaggccttcgtgctcgat
ccgcggtcgccagagggcggtttcaacgtgctcgactgggtcggtcagcacggtgcgacc
aaggaggaggacattgccgccgtcgcgtcatggatcatgaccgacaatccgcgccagggc
tcggcacgggacgacttcttccgcgcctcggcgctgcagctgctgacggcgttggtcgcc
gacatctgcctgtccggccatacggaaaagaaggaccagcatctgcgccaggtccgcgcc
aacctctccgagccggagccgaagctgcggcagcggcttcaggcgatctacgacaactcg
gcgtccggcttcgtgaaggaaaacgtcgcgccgttcatcgccatgacgcctgagacgttc
agcggcgtctacgccaatgcggcgaaggagacgcactggctctcctacgccaactatgca
gcgctggtgtcgggatcgagcttcaccaccgccgagctcgcggacgggcaaaccgacatc
ttcatcaacctcgacctgaagacgctggagaaccatccgggcctcgcccgcgtcatcatc
ggctcgctgctcaacgccatctacaatcgcaatggcgaggtcagcggtcacaccctgttc
ctgctcgatgaggtcgcccgcctcggctatctgcgcatcctcgagactgcccgcgacgca
ggccgcaaatacggcatcaccctgttgatgctctatcagtcgatcggccagatgcgggaa
gcctatggcggccgcgacgcgaccagcaaatggttcgagagcgcgtcctggatctcgttc
tcggctatcaacgatcccgagacggcggactacatctcgaagcgctgcggcgacaccaca
gtcgaggctgatcagctcagccggtcatcacaaatgtcgggctcgtcgcggacgcgatcg
aaacagctcgcccggcgcccgctgatcatgccgcatgaggtcctgcgcatgcgaaccgac
gagcagattgtgttcaccgccgggaatccgccgctgcgatgcggacgcgcgatctggttc
cggcggcgcgatatgaaagcatgtaccggccaggacccgtaccatcgcagcgaagccgtt
cgatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (6)   

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