KEGG   Nitrosococcus halophilus: Nhal_3939
Entry
Nhal_3939         CDS       T01198                                 
Name
(GenBank) protease Do
  KO
K04772  serine protease DegQ [EC:3.4.21.-]
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:nhl01002]
    Nhal_3939
Peptidases and inhibitors [BR:nhl01002]
 Serine peptidases
  Family S1: chymotrypsin family
   Nhal_3939
SSDB
Motif
Pfam: Trypsin_2 Trypsin PDZ_2 PDZ PDZ_6 Peptidase_S46 Tricorn_PDZ GRASP55_65 PDZ_1 PDZ_4
Other DBs
NCBI-ProteinID: ADE16949
UniProt: D5C412
Position
4054076..4055194
AA seq 372 aa
MRIGKFFIVGLLSIALGNPSANAGLPLSLFEDSEELPSLAPMLEKATPSVVNIATRNRTP
VPGNPLFKDPFFRFFFNPPDSPKTIPRQSLGSGVIISAREGLVLTNNHVIDKADEITVTL
RDGRQLSAKVVGTDPPSDIAVIKIPAQDLTALPMANSDTLRVGDFVIAIGNPFGLGQTVT
SGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLRGELVGINTAIFTPDGGNVGI
GFAIPSNMAREIMEQLLKYGEVHRGRLGIAVQDLTPELIKAFGIDIRQGAVVVQVLPNSA
AAESELEVGDIIVAVDDQPVHNADQLRNLIGLSRAGKQINLTVLRNGKEIHLTITIKKIT
TTSAPGKIAPYS
NT seq 1119 nt   +upstreamnt  +downstreamnt
ttgaggatcgggaaattctttatagtcggcctgctgagtatcgcccttgggaaccccagc
gctaacgctggtttgcccttgagtttgttcgaggattcagaggaacttccctcccttgca
cccatgctcgagaaggctaccccctccgtggtcaacattgcaactcgcaaccgaacgcct
gttcctggaaatcccttattcaaagatccctttttccgttttttctttaatccacccgac
tcccctaaaacgattccccggcaaagtcttggctccggagtcatcatcagtgcccgcgaa
ggccttgtcctcaccaataatcatgtgattgataaagccgatgagattacggttaccctc
cgtgacgggcgccaactttccgcaaaggtagtcggtaccgatccccctagcgatatcgcg
gtcattaagattcccgctcaagatcttaccgctttgcccatggccaattccgatactctc
cgggtaggggacttcgtgattgccatcggcaatccctttggccttgggcaaaccgtcact
tcaggaattgtcagcgccttaggccgcagcggccttggaatcgaaggatatgaaaatttt
attcaaaccgatgcctccattaaccctggcaattcaggtggggcattggtcaatctccgg
ggagagctggtagggatcaatacggctatttttacccccgatggcggcaatgtgggcatc
ggctttgctattcccagtaatatggctcgggaaattatggaacaactccttaagtatggt
gaggtgcaccgtggtcggctcgggattgctgtccaagatctgacacctgagctgattaag
gctttcggtatcgatattcgtcagggagcggtagttgttcaagttctccccaactcggca
gccgcagaaagtgaacttgaggtaggcgacattatcgtggccgtcgatgatcagccggtt
cacaacgccgaccaactgcgcaacttaattggtctatctcgggcagggaaacaaatcaat
cttaccgtactccgtaatgggaaagagatccacctgaccatcaccattaagaaaatcacg
acaacatcggcacctggaaaaatagcgccttattcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system