KEGG   Niabella ginsenosidivorans: A8C56_08365
Entry
A8C56_08365       CDS       T04418                                 
Name
(GenBank) deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nia  Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:nia00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nia02048]
    A8C56_08365
Enzymes [BR:nia01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     A8C56_08365
Prokaryotic defense system [BR:nia02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   A8C56_08365
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ANH80990
UniProt: A0A1A9I2P7
Position
2000360..2003419
AA seq 1019 aa
MGNLSEFHGVEKPVIAWLGKMGWKIQTNGELKAYNRPFSNPVLEQLLIEKTRQINKIDLD
IAKRAVELLLQNLNHPSSILGNEQFLDKLVSGVTLSIKEDDIDVFFIDFDNIWENDFIVT
NQYWVQGFKMVKTDIVLLVNGVPLVPIEAKQRARKGTNWLEGVKQFSTYAQRADKLFMCH
AFGVACNGRIAKYGIPGASSSYFNEWKSTIIDTSADNPILHPQNDLCLNHFDEKEQLWHF
DVERLPNGEVLEKMKLGIVGLLQPARVLDILKNFLVFERTENKIIKKVARYQQLRAANKI
AERVINSDLNQGVIWHTQGSGKSLTMLYTAYKLLHAQQLNDPTIYIVVDRKDLREQIGGT
FDDCEFPNAREINNIGDLKYIIDKAPSGVFITTIQKFRELGDRQDLRDNIIILIDEAHRT
QYGDFQMELQAVLPNAKRFAFTGTPIPKTHQEFGIVKQKGDHEYYLDRYSIQDAIDDGAT
MPIRYTFGPQEWFLDKDKLKQGYEEITAELTEDEKHLVEKRVQPWKVFLKHPERITTLAR
DIAADYREMVEPQGYKAQIVACDKEACVLYYNELLNYFDRSEIAIIFSTGTYDEGEKYAL
FKDHYREDKDRKKLIRQFKKRITEEELKLGNNLKVLIVCNMLLTGFDAPIEQTMYLDSPL
RDHNLLQAVARTNRPYDDKESKLSKEFGRIVDYVGVFKNYKEALNYDPEDIGEFEDVESL
VQTFPKVLDAAFKPFENIKLEDTYDCAMAIVRKLSELDQGKFENNYREVLQLWESSSPNP
ALRPHKTKYLWLNEIYEIYLEEFKRLDFDAEIHAAKTRKLIQENSKLINFKGHLPEINID
SNYLDKLKETKLTPSDKAEKIIRDIETVIRQNEVNSAIYVEFQNRLDDLIRQKQEESKAI
EEILLQLGVLYSELDDVASLPQRMGFPGKGSFEIFTLIKNESKNNFEEDRVKEFALEATE
KIKAKIYIGWQDVPREYERIQTDIELLTVHPKYESLKIDDNQELLDRIMKSVLKNFSLE
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgggaaacttatctgaatttcatggtgttgaaaaaccggtcattgcttggctgggcaaa
atgggctggaaaatccaaaccaatggagagcttaaagcctataaccgtcctttttccaat
cccgtattggaacaattgctgattgagaaaacccggcaaataaataaaatagatctggat
atcgccaaaagggctgtcgagttactgttgcaaaatctcaatcatccttcgtccatacta
ggaaatgagcagtttttggataagctggtttcaggcgttaccctctccataaaagaggat
gatattgatgtgttttttattgatttcgataatatctgggaaaacgattttattgtcact
aaccaatattgggtgcaaggttttaaaatggtaaaaaccgacattgtattattggtgaac
ggtgttcctttagtgcctatagaagccaagcaaagagcccgtaaaggaaccaactggctg
gaaggggtaaaacagttttctacctatgcgcaacgagcggataagctatttatgtgtcat
gcttttggagtagcctgtaatggccgcattgccaaatacggtattccgggagcttcttct
tcctatttcaacgaatggaagagtaccattattgatacttctgcagataatcctatactg
catccgcaaaatgatctgtgtcttaaccacttcgatgaaaaagagcagctttggcatttt
gatgtagaacggttgcccaatggtgaagtgttggaaaaaatgaaactcggcattgtaggg
ttgttgcaaccagcacgtgttttggatatattgaagaacttcctggtatttgaaagaaca
gaaaataaaatcatcaaaaaagtagctcgttatcagcaattacgtgcagctaataaaata
gctgaacgggttattaattcagatctcaaccagggcgtcatctggcatacgcagggatcg
ggtaagagtttgaccatgttgtacacggcgtacaaactattacatgcgcaacaacttaat
gatccaacaatctatattgtagtagatagaaaagatttacgggaacaaattgggggtact
tttgatgattgtgaatttccaaatgcccgcgagattaataatattggcgatctaaaatat
attattgacaaagcgccatcaggtgtatttattaccactattcaaaaattcagagaactg
ggcgatcgtcaggatttgagagataatattattatcctgattgatgaagcacaccgtaca
cagtatggcgattttcaaatggaactgcaagccgttttacctaatgcaaaacgttttgct
tttacaggaacacccattcctaaaacgcatcaggaatttggcatcgtaaaacaaaaaggc
gaccatgaatattatttagatcggtacagcattcaggatgcaatagatgatggtgctacc
atgcccatccgttatactttcggtccgcaggaatggtttttggataaagacaaattaaaa
cagggttacgaagaaataaccgcagagctgaccgaagatgaaaaacatctggtagaaaaa
cgggtacaaccctggaaagtatttttaaaacatcccgagcgtattaccacattagcccgg
gatattgctgctgactacagggaaatggtagaaccgcaaggttataaagcccagattgta
gcttgcgataaagaagcctgtgttttatattacaatgaactattgaactactttgaccgc
tccgaaatagccatcattttttcgaccggaacctacgatgaaggagaaaaatacgcgtta
tttaaagaccattatcgtgaagataaagaccggaaaaagctcattcgtcaattcaaaaaa
agaataacggaagaggaattaaaactgggcaacaatttgaaagtactgattgtctgcaat
atgctattgacaggctttgacgcacccattgagcaaaccatgtacctggatagtccactt
cgtgatcataatcttttacaggcagtagcacgtaccaatcgtccttatgatgacaaagaa
agcaagttgtcaaaagaatttgggcgcattgtagattatgtaggtgtcttcaaaaattat
aaagaagctctgaattacgatccggaagatattggtgaatttgaagacgtggaaagttta
gtacaaacatttcctaaagtattagacgcagcttttaagccctttgaaaatattaagttg
gaagatacctatgattgtgccatggcaatagtaagaaaactttcagaacttgatcaggga
aaatttgaaaacaattaccgggaagtattgcaattatgggaatctagctcacccaatccc
gcattaagaccgcataaaacaaaatatttgtggttgaatgaaatttatgaaatctactta
gaagaatttaaacgattggattttgatgcagaaatccatgccgcaaagacaagaaaactg
attcaggaaaacagtaagctcatcaacttcaaaggccatcttcctgaaatcaatatagat
tccaactatctggataagctcaaagaaacaaagcttacaccatctgataaagcggagaaa
attattcgtgacattgagaccgtcattcgtcagaacgaagtgaacagtgctatctatgtt
gaatttcaaaaccgcctggatgatctgatacgtcaaaaacaggaagaaagcaaagccata
gaagaaattctactacaattaggtgtattatattcggagttggatgatgtagcttcattg
ccacaaagaatgggcttcccgggaaaaggcagttttgaaatatttaccttgattaaaaac
gaaagcaagaacaattttgaagaagaccgggtaaaagagtttgctttagaagctacggag
aaaattaaagcaaaaatatatatcggctggcaagacgtacccagagagtatgaacgcata
cagacagatatagagcttttaacagtgcatcctaaatatgaatcgctgaaaatagacgat
aatcaggaattgctggataggattatgaaatctgtactcaaaaatttcagtttggaataa

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